bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-11_CDS_annotation_glimmer3.pl_2_2

Length=52
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_D_022_Microviridae_AG0392_putative.VP1      19.2    3.2
  Alpavirinae_Human_feces_B_007_Microviridae_AG067_putative.VP4       18.9    4.1
  Alpavirinae_Human_feces_C_016_Microviridae_AG0274_putative.VP1      18.5    7.0


> Alpavirinae_Human_feces_D_022_Microviridae_AG0392_putative.VP1
Length=589

 Score = 19.2 bits (38),  Expect = 3.2, Method: Composition-based stats.
 Identities = 13/49 (27%), Positives = 22/49 (45%), Gaps = 5/49 (10%)

Query  1    MEAKGFV-YVVVFQNSLDERVAHVYTGTFDRVFKKAKS----LCSSSNY  44
            M++K +  +V     ++DE      T  F R+++   S    LC   NY
Sbjct  506  MDSKAYGDFVSAAGTNIDELSLQRLTAFFKRIYESPSSCPYILCGDFNY  554


> Alpavirinae_Human_feces_B_007_Microviridae_AG067_putative.VP4
Length=515

 Score = 18.9 bits (37),  Expect = 4.1, Method: Composition-based stats.
 Identities = 7/21 (33%), Positives = 11/21 (52%), Gaps = 0/21 (0%)

Query  28  FDRVFKKAKSLCSSSNYFIRE  48
           FDR+F + +  C     F+ E
Sbjct  23  FDRIFIRERCQCWIMETFVLE  43


> Alpavirinae_Human_feces_C_016_Microviridae_AG0274_putative.VP1
Length=641

 Score = 18.5 bits (36),  Expect = 7.0, Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 16/35 (46%), Gaps = 0/35 (0%)

Query  12   FQNSLDERVAHVYTGTFDRVFKKAKSLCSSSNYFI  46
            F  +LD+      TGT   +FK       +SN F+
Sbjct  268  FLYALDDVRNITRTGTGCELFKTFSDALPTSNSFV  302



Lambda      K        H        a         alpha
   0.326    0.137    0.386    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3741948