bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-11_CDS_annotation_glimmer3.pl_2_6
Length=357
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_33_017_Microviridae_AG0156_putative.VP2 75.5 4e-17
Alpavirinae_Human_gut_22_017_Microviridae_AG0396_hypothetical.p... 74.3 1e-16
Alpavirinae_Human_feces_D_008_Microviridae_AG099_hypothetical.p... 63.2 9e-13
Alpavirinae_Human_feces_D_031_Microviridae_AG0421_hypothetical.... 61.6 2e-12
Alpavirinae_Human_feces_A_021_Microviridae_AG079_hypothetical.p... 58.5 3e-11
Alpavirinae_Human_feces_C_043_Microviridae_AG0320_hypothetical.... 57.8 4e-11
Alpavirinae_Human_feces_A_034_Microviridae_AG0101_hypothetical.... 55.5 2e-10
Alpavirinae_Human_gut_33_005_Microviridae_AG0182_hypothetical.p... 53.1 1e-09
Alpavirinae_Human_feces_A_032_Microviridae_AG0219_putative.VP2 43.5 1e-06
Alpavirinae_Human_gut_21_005_Microviridae_AG012_hypothetical.pr... 39.3 3e-05
> Alpavirinae_Human_gut_33_017_Microviridae_AG0156_putative.VP2
Length=353
Score = 75.5 bits (184), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/126 (39%), Positives = 68/126 (54%), Gaps = 26/126 (21%)
Query 28 NKGNASIAQQNNAFNEKMLQKQMDYNTQMYQQQLGDQWQFYNDAKQNSWDMFNAANDYNS 87
N+ N I Q NN FNE+M +Q D+ +M+N N YN+
Sbjct 32 NQMNYKINQMNNQFNERMAMQQRDFQE----------------------NMWNKENTYNT 69
Query 88 ASAQRERLEAAGLNPYLMMSGGNagtataqsspqasspsaqgVTPPTATPYSADYSGITQ 147
ASAQR+RLE AGLNPYLMM+GG++G + + + ++S S V P+ AD+SGI Q
Sbjct 70 ASAQRQRLEEAGLNPYLMMNGGSSGVSQSAGTGASASSSGTAVFQ----PFQADFSGIQQ 125
Query 148 GLGMVL 153
+G V
Sbjct 126 AIGSVF 131
> Alpavirinae_Human_gut_22_017_Microviridae_AG0396_hypothetical.protein.BACPLE
Length=386
Score = 74.3 bits (181), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 136/303 (45%), Gaps = 68/303 (22%)
Query 28 NKGNASIAQQNNAFNEKMLQKQMDYNTQMYQQQLGDQWQFYNDAKQNSWDMFNAANDYNS 87
N+ N I Q NN FNE+M +Q + WQ +M+N N YN+
Sbjct 32 NQMNYKINQMNNQFNERMAIQQRN-------------WQE---------NMWNKENAYNT 69
Query 88 ASAQRERLEAAGLNPYLMMSGGNagtataqsspqasspsaqgVTPPTATPYSADYSGITQ 147
ASAQR+RLE AGLNPYLMM+GG+AG A + + A+S S V P+ ADYSGI
Sbjct 70 ASAQRQRLEEAGLNPYLMMNGGSAGVAQSAGTGSAASSSGNAVMQ----PFQADYSGIGS 125
Query 148 GLGMVLDKIATQPDRDVKSAEADNLRIEGKYKAAKTIAEIVQMRTNAKTQEGRLALDKLI 207
+G + Q ++ + + A+ +A+ M T + G+L +
Sbjct 126 SIGNIFQYELMQSEKS-------------QLQGARQLADAKAMETLSNIDWGKLTDETRG 172
Query 208 YSIDKDLKSSQMDVNRE--SIANMQAERKLTNVQ--TLLVDKQL-----SWMDAQSKMDL 258
+ L +Q+ +E NM + Q +L+D + ++D ++DL
Sbjct 173 FLKSTGLARAQLGYAKEQQEADNMAMTGLVLRAQRSGMLLDNEAKGILNKYLDQHQQLDL 232
Query 259 AQKAADIQLKYAQGAL------------------TRKQ-VDHEIA-KIAETEVRTSLDIQ 298
+ KAAD + A G + TR Q + +E+A +IAE+++ ++
Sbjct 233 SVKAADYYQRMAAGYVSYAEAKKALAEEALAAARTRGQNISNEVASRIAESQIAANIAAN 292
Query 299 EQT 301
E +
Sbjct 293 ESS 295
> Alpavirinae_Human_feces_D_008_Microviridae_AG099_hypothetical.protein.BACEGG.02723
Length=418
Score = 63.2 bits (152), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 122/278 (44%), Gaps = 48/278 (17%)
Query 34 IAQQNNAFNEKMLQKQMDYNTQMYQQQLGDQWQFYNDAKQNSWDMFNAANDYNSASAQRE 93
I Q NN FN K D+ T +++ QW D +N N YN SAQR
Sbjct 41 INQINNEFNASEALKNRDFQTS--EREASQQWNL---------DQWNRENAYNDPSAQRA 89
Query 94 RLEAAGLNPYLM-MSGGNagtataqsspqasspsaqgVTP--PTATPYSADYSGITQGLG 150
R+EAAG NPY M + G+A T+ AQSSP + S + TP P T Y+AD+ + G+
Sbjct 90 RMEAAGFNPYNMNIDAGSASTSGAQSSPGSGSQATASHTPSLPAYTGYAADFQNVASGIA 149
Query 151 MVLDKIATQPDRDVKSAEADNLRIEGKYKAAKTIAEIVQMRTNAKTQEGRLALDKLIYSI 210
+ + +++ D + SA D+L K I + T+ +Y +
Sbjct 150 QIGNAVSSGIDARLTSAYGDDLM---KADIMSKIGGNSEWLTD-------------VYKL 193
Query 211 DKDLKSSQM---DVNRESIANMQAERKLTNVQTLLVDKQL------------SWMDAQSK 255
+ ++ + D+ ++ + N+ E TN++ L L +M AQ +
Sbjct 194 GRQNEAPNLLGIDLRKKRLENLSTE---TNIKVALAQGALLGLQAEGQRIVNKFMPAQQQ 250
Query 256 MDLAQKAADIQLKYAQGALTRKQVDHEIAKIAETEVRT 293
+ K A+ +Y G L+ QV +I + A E +T
Sbjct 251 AEFFLKTANAFAQYKAGKLSEAQVKTQIKQQALLEAQT 288
> Alpavirinae_Human_feces_D_031_Microviridae_AG0421_hypothetical.protein.BACEGG.02723
Length=418
Score = 61.6 bits (148), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/279 (27%), Positives = 121/279 (43%), Gaps = 48/279 (17%)
Query 34 IAQQNNAFNEKMLQKQMDYNTQMYQQQLGDQWQFYNDAKQNSWDMFNAANDYNSASAQRE 93
I Q NN FN K D+ T +++ QW D +N N YN SAQR
Sbjct 41 INQINNEFNASEALKNRDFQTS--EREASQQWNL---------DQWNRENAYNDPSAQRA 89
Query 94 RLEAAGLNPYLM-MSGGNagtataqsspqasspsaqgVTP--PTATPYSADYSGITQGLG 150
R+EAAG NPY M + G+ T+ AQSSP + S + TP P T Y+AD+ + G+
Sbjct 90 RMEAAGFNPYNMNIDPGSGSTSGAQSSPGSGSSATASHTPSLPAYTGYAADFQNVASGIA 149
Query 151 MVLDKIATQPDRDVKSAEADNLRIEGKYKAAKTIAEIVQMRTNAKTQEGRLALDKLIYSI 210
+ + +A+ D + SA D+L K I + T+ +Y +
Sbjct 150 QIGNAVASGIDARLTSAYGDDLM---KADIMSKIGGNSEWLTD-------------VYKL 193
Query 211 DKDLKSSQM---DVNRESIANMQAERKLTNVQTLLVDKQL------------SWMDAQSK 255
+ ++ + D+ ++ + N+ E TN++ L L +M AQ +
Sbjct 194 GRQNEAPNLLGIDLRKKRLENLSTE---TNIKVALAQGALLGLQAEGQRIVNKFMPAQQQ 250
Query 256 MDLAQKAADIQLKYAQGALTRKQVDHEIAKIAETEVRTS 294
+ K A+ +Y G L+ QV +I + A E + +
Sbjct 251 AEFFLKTANAFAQYKAGKLSEAQVKTQIKQQALLEAQAA 289
> Alpavirinae_Human_feces_A_021_Microviridae_AG079_hypothetical.protein.BACEGG.02723
Length=397
Score = 58.5 bits (140), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 0/83 (0%)
Query 77 DMFNAANDYNSASAQRERLEAAGLNPYLMMSGGNagtataqsspqasspsaqgVTPPTAT 136
DM+N N+YNSA+ QR RLE AGLNPY+MM+GGNAG A + ++P + G T T
Sbjct 33 DMWNKTNEYNSATNQRARLEEAGLNPYMMMNGGNAGEAGSVTAPSTPQGAMPGATGDTTE 92
Query 137 PYSADYSGITQGLGMVLDKIATQ 159
+ + ++ +G D + TQ
Sbjct 93 NVISGLNSVSNAIGQFYDNMLTQ 115
> Alpavirinae_Human_feces_C_043_Microviridae_AG0320_hypothetical.protein.BACEGG.02723
Length=396
Score = 57.8 bits (138), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (63%), Gaps = 4/70 (6%)
Query 41 FNEKMLQKQMDYNTQMYQQQLGDQWQFYNDAKQNSWDM--FNAANDYNSASAQRERLEAA 98
+N+ LQ+QM +N Q Q QLG W ++QN W++ +N N YN+ +AQR RLEAA
Sbjct 37 YNKWALQQQMAFNEQ--QAQLGRDWSEEMMSQQNEWNLQQWNRENAYNTPAAQRSRLEAA 94
Query 99 GLNPYLMMSG 108
GLN L M G
Sbjct 95 GLNAALAMQG 104
> Alpavirinae_Human_feces_A_034_Microviridae_AG0101_hypothetical.protein.BACPLE
Length=365
Score = 55.5 bits (132), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 2/57 (4%)
Query 55 QMYQQQLGDQWQFYNDAKQNSW--DMFNAANDYNSASAQRERLEAAGLNPYLMMSGG 109
Q+ Q++ ++W K + MF+A+N++NSA +QR RLE AGLNPYLMM+GG
Sbjct 33 QLQMQKIQNEWASSESQKSRDFAKSMFDASNEWNSAKSQRARLEEAGLNPYLMMNGG 89
> Alpavirinae_Human_gut_33_005_Microviridae_AG0182_hypothetical.protein.BACEGG.02723
Length=354
Score = 53.1 bits (126), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (62%), Gaps = 4/63 (6%)
Query 48 KQMDYNT--QMYQQQLGDQWQFYNDAKQNSW--DMFNAANDYNSASAQRERLEAAGLNPY 103
KQ D N Q+ QQ+ ++W K + MF+A N++NSA QR RLEAAGLNPY
Sbjct 24 KQGDKNRKHQLEMQQIQNEWASSESQKSRDFAKSMFDATNEWNSAKNQRARLEAAGLNPY 83
Query 104 LMM 106
LMM
Sbjct 84 LMM 86
> Alpavirinae_Human_feces_A_032_Microviridae_AG0219_putative.VP2
Length=355
Score = 43.5 bits (101), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/92 (32%), Positives = 47/92 (51%), Gaps = 7/92 (8%)
Query 25 VAGNKGNASIAQQNNAFNEKMLQKQMDYNTQMYQQQLGD-------QWQFYNDAKQNSWD 77
+AG A + ++ A EK+ ++QM+Y +MY Q D Q Q+ +A + S +
Sbjct 18 LAGTIAGAVSSSKDRAHQEKLQKQQMEYGREMYALQSADEDRRMEQQNQWNKEAAEQSQE 77
Query 78 MFNAANDYNSASAQRERLEAAGLNPYLMMSGG 109
DY Q ++++AAGLNP L+ GG
Sbjct 78 YAKEMFDYTGYENQVKQMKAAGLNPALLNGGG 109
> Alpavirinae_Human_gut_21_005_Microviridae_AG012_hypothetical.protein.BACPLE
Length=383
Score = 39.3 bits (90), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (33%), Positives = 46/88 (52%), Gaps = 7/88 (8%)
Query 25 VAGNKGNASIAQQNNAFNEKMLQKQMDYNTQMYQQQLGDQWQFYNDAKQNSW--DMFNAA 82
V G G A+I+ + F K +KQ + + ++++ ++ Q W M+
Sbjct 25 VIGGIGGAAISAIGSFFGNKSNRKQ---SAEAFERE--SKFAREERLAQQQWIEQMYEKN 79
Query 83 NDYNSASAQRERLEAAGLNPYLMMSGGN 110
N YNS +AQ +RL+ AGLNP LM S G+
Sbjct 80 NSYNSPAAQMQRLKEAGLNPDLMYSRGD 107
Lambda K H a alpha
0.311 0.125 0.341 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 31036608