bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-15_CDS_annotation_glimmer3.pl_2_2
Length=142
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.... 102 2e-29
Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.p... 45.4 2e-08
Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.p... 42.0 2e-07
Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.... 38.5 8e-07
Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.p... 32.0 3e-04
Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.p... 26.9 0.016
Alpavirinae_Human_feces_A_034_Microviridae_AG0103_hypothetical.... 23.5 0.28
Gokush_Pavin_110_Microviridae_AG050_putative.VP3 23.5 0.63
Gokush_Bourget_224_Microviridae_AG0244_putative.VP3 22.7 1.2
Gokush_Bourget_164_Microviridae_AG048_putative.VP3 22.3 1.7
> Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.protein
Length=150
Score = 102 bits (254), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 52/114 (46%), Positives = 75/114 (66%), Gaps = 2/114 (2%)
Query 5 DIINVLSNSEFTTVRPIDELRFVEELDGSIRFVSDATLLLNEQRIINDIGEDNYRNFIRQ 64
D VL ++ + V P++ LR+V++ DG IR+VSD LL+N +R+ N IGE++Y N IR
Sbjct 17 DTARVLKSAIYCQVGPVEMLRYVKDDDGVIRYVSDVNLLMNAERLRNQIGEESYLNLIRG 76
Query 65 LQVNPSSPYKDAKFTDEQLMTEIKSRYVQSPSEVREWVRDMLDKQEQISDEVKA 118
+Q SPY D K+TDEQL T IKSR++Q+PSEV W+ + + I E+ A
Sbjct 77 IQPK-KSPY-DNKYTDEQLFTAIKSRFIQTPSEVLAWIESLGSAGDSIRSELDA 128
> Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.protein
Length=205
Score = 45.4 bits (106), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (51%), Gaps = 3/99 (3%)
Query 20 PIDELRFVEELDGSIRFVSDATLLLNEQRIINDIGEDNYRNFIRQLQVNPSSPYKDAKFT 79
P+ + F DGS+ F SD +L Q+ I+++ + R ++ L P S +
Sbjct 85 PVGDFLFDHNADGSVTFCSDYGILFG-QKAIDNMNQVQLRRYMNSLV--PRSSNYTRNYN 141
Query 80 DEQLMTEIKSRYVQSPSEVREWVRDMLDKQEQISDEVKA 118
D+ L+ K R +QS +E+ W+ +L + + + +++A
Sbjct 142 DDFLLDYCKDRNIQSATEMASWLDHLLSEGQSLESDLQA 180
> Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.protein
Length=171
Score = 42.0 bits (97), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 4/82 (5%)
Query 27 VEELDGS--IRFVSDATLLLNEQRIINDIGEDNYRNFIRQLQVNPSSPYKDA-KFTDEQL 83
+++ D S +R+ SD L+L+ + + + G D F + Q +PS + +DE L
Sbjct 53 IDDTDASRPVRYTSDIRLILHNKDLASRAGVDVASKFGQSKQ-SPSQIQQIMDTMSDEDL 111
Query 84 MTEIKSRYVQSPSEVREWVRDM 105
+ ++SRY+QSPSE+ W +++
Sbjct 112 LATVRSRYIQSPSEILAWSKEL 133
> Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.protein
Length=59
Score = 38.5 bits (88), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (76%), Gaps = 0/29 (0%)
Query 84 MTEIKSRYVQSPSEVREWVRDMLDKQEQI 112
M IKSRY+QSPSEVR W+ ++DK + +
Sbjct 1 METIKSRYLQSPSEVRAWLETLVDKADVV 29
> Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.protein
Length=69
Score = 32.0 bits (71), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 10/40 (25%), Positives = 25/40 (63%), Gaps = 0/40 (0%)
Query 78 FTDEQLMTEIKSRYVQSPSEVREWVRDMLDKQEQISDEVK 117
+D+ L+ ++SR++Q+PSE+ W +++ E + + +
Sbjct 4 MSDDDLLATVRSRHIQAPSEIIAWSKELSAYAEHLESQAQ 43
> Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.protein
Length=63
Score = 26.9 bits (58), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 13/32 (41%), Positives = 20/32 (63%), Gaps = 0/32 (0%)
Query 84 MTEIKSRYVQSPSEVREWVRDMLDKQEQISDE 115
M+ IK R VQS +E++ W + DK ++I E
Sbjct 1 MSLIKPRNVQSHAELKAWSEFLTDKAKEIQTE 32
> Alpavirinae_Human_feces_A_034_Microviridae_AG0103_hypothetical.protein
Length=62
Score = 23.5 bits (49), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 9/35 (26%), Positives = 20/35 (57%), Gaps = 0/35 (0%)
Query 84 MTEIKSRYVQSPSEVREWVRDMLDKQEQISDEVKA 118
M K R +QS +E++ W+ ++ + + + +V A
Sbjct 1 MEYCKDRNIQSYTEMQAWLEHLISEGQSLEGDVAA 35
> Gokush_Pavin_110_Microviridae_AG050_putative.VP3
Length=132
Score = 23.5 bits (49), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 11/37 (30%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query 79 TDEQLM---TEIKSRYVQSPSEVREWVRDMLDKQEQI 112
DE M +++SR+ SP E E+ D + +E +
Sbjct 78 ADENFMRMDAKVRSRFHNSPQEFLEFFADPANTEEAV 114
> Gokush_Bourget_224_Microviridae_AG0244_putative.VP3
Length=140
Score = 22.7 bits (47), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/37 (30%), Positives = 18/37 (49%), Gaps = 3/37 (8%)
Query 79 TDEQLM---TEIKSRYVQSPSEVREWVRDMLDKQEQI 112
DE M +++SR+ SP E E+ D + E +
Sbjct 78 ADENFMRMDAKVRSRFHNSPQEFLEFFADSANYDEAV 114
> Gokush_Bourget_164_Microviridae_AG048_putative.VP3
Length=132
Score = 22.3 bits (46), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/37 (30%), Positives = 18/37 (49%), Gaps = 3/37 (8%)
Query 79 TDEQLM---TEIKSRYVQSPSEVREWVRDMLDKQEQI 112
DE M +++SR+ SP E E+ D + E +
Sbjct 78 ADENFMRMDAKVRSRFHNSPQEFLEFFADPANYDEAV 114
Lambda K H a alpha
0.315 0.133 0.360 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 9101646