bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-16_CDS_annotation_glimmer3.pl_2_8
Length=69
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_B_021_Microviridae_AG0374_hypothetical.... 121 6e-39
Alpavirinae_Human_feces_A_047_Microviridae_AG0318_hypothetical.... 119 2e-38
Alpavirinae_Human_feces_C_029_Microviridae_AG0113_hypothetical.... 119 3e-38
Alpavirinae_Human_feces_A_048_Microviridae_AG092_hypothetical.p... 114 4e-36
Alpavirinae_Human_feces_B_020_Microviridae_AG0356_hypothetical.... 47.0 2e-10
Gokush_Human_gut_33_003_Microviridae_AG064_putative.peptidase.M... 21.2 1.2
Pichovirinae_JCVI_003_Microviridae_AG0346_hypothetical.protein.... 19.6 4.6
Gokush_Human_feces_A_013_Microviridae_AG008_putative.VP3 19.2 5.7
Gokush_gi|19387569|ref|NP_598320.1|_capsid_protein_[Spiroplasma... 18.9 8.9
> Alpavirinae_Human_feces_B_021_Microviridae_AG0374_hypothetical.protein
Length=66
Score = 121 bits (303), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 59/65 (91%), Positives = 62/65 (95%), Gaps = 0/65 (0%)
Query 1 MAETKFTAIYVNNEGKIIEREIPGMNTYKIAKKFAKILNDPEETKLVCVVESWKLYPNEN 60
MA TKFTAIYVNNEGKIIEREIPGMNTYKIA+KFA +LNDPEETKLVCV+ESWKLYP EN
Sbjct 1 MAATKFTAIYVNNEGKIIEREIPGMNTYKIAEKFAIMLNDPEETKLVCVIESWKLYPKEN 60
Query 61 EKTEK 65
EKTEK
Sbjct 61 EKTEK 65
> Alpavirinae_Human_feces_A_047_Microviridae_AG0318_hypothetical.protein
Length=66
Score = 119 bits (299), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 58/65 (89%), Positives = 61/65 (94%), Gaps = 0/65 (0%)
Query 1 MAETKFTAIYVNNEGKIIEREIPGMNTYKIAKKFAKILNDPEETKLVCVVESWKLYPNEN 60
MA TKFTAIY +N GKIIEREIPGMNTYKIA+KFAK+LNDPEETKLVCVVESWKLYP EN
Sbjct 1 MAATKFTAIYADNNGKIIEREIPGMNTYKIAEKFAKMLNDPEETKLVCVVESWKLYPKEN 60
Query 61 EKTEK 65
EKTEK
Sbjct 61 EKTEK 65
> Alpavirinae_Human_feces_C_029_Microviridae_AG0113_hypothetical.protein
Length=73
Score = 119 bits (298), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 58/65 (89%), Positives = 62/65 (95%), Gaps = 0/65 (0%)
Query 1 MAETKFTAIYVNNEGKIIEREIPGMNTYKIAKKFAKILNDPEETKLVCVVESWKLYPNEN 60
MA TKFTAIYVNNEGKIIEREIPGMNTYKIA+KFA +LNDP+ETKLVCVVESWKLYP EN
Sbjct 1 MAATKFTAIYVNNEGKIIEREIPGMNTYKIAEKFAMMLNDPKETKLVCVVESWKLYPKEN 60
Query 61 EKTEK 65
EKT+K
Sbjct 61 EKTKK 65
> Alpavirinae_Human_feces_A_048_Microviridae_AG092_hypothetical.protein
Length=73
Score = 114 bits (285), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 53/65 (82%), Positives = 61/65 (94%), Gaps = 0/65 (0%)
Query 1 MAETKFTAIYVNNEGKIIEREIPGMNTYKIAKKFAKILNDPEETKLVCVVESWKLYPNEN 60
MA TKFTAIY+NNEGKII+REIPGMN+YKIA+KFA +LNDPEETKLVCV+E+WK+YPN
Sbjct 1 MAATKFTAIYINNEGKIIKREIPGMNSYKIAEKFAMMLNDPEETKLVCVIETWKMYPNNY 60
Query 61 EKTEK 65
EKTEK
Sbjct 61 EKTEK 65
> Alpavirinae_Human_feces_B_020_Microviridae_AG0356_hypothetical.protein
Length=55
Score = 47.0 bits (110), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (74%), Gaps = 2/46 (4%)
Query 20 REIPGMNTYKIAKKFAK-ILNDPEETKLVCVVESWKLYPNEN-EKT 63
+E+PG +TYK+A AK ++ + E ++V VVESWKLYPNE EKT
Sbjct 2 KELPGKHTYKVAVTVAKALMQEVEGEEIVAVVESWKLYPNETKEKT 47
> Gokush_Human_gut_33_003_Microviridae_AG064_putative.peptidase.M15_3
Length=130
Score = 21.2 bits (43), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query 32 KKFAKILND--PEETKLVCVVESWKLYPNENEKTEKG 66
K+ AK+L+ P ++ V ++W + NEK KG
Sbjct 94 KELAKVLSSIVPNSGGII-VYDNWVHFDTRNEKYRKG 129
> Pichovirinae_JCVI_003_Microviridae_AG0346_hypothetical.protein.BACEGG.02723
Length=252
Score = 19.6 bits (39), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 14/24 (58%), Gaps = 0/24 (0%)
Query 26 NTYKIAKKFAKILNDPEETKLVCV 49
NT + K ++ ILND + ++ V
Sbjct 179 NTANVKKTYSSILNDVKSREMTDV 202
> Gokush_Human_feces_A_013_Microviridae_AG008_putative.VP3
Length=160
Score = 19.2 bits (38), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 10/44 (23%), Positives = 23/44 (52%), Gaps = 6/44 (14%)
Query 10 YVNNEGKIIEREIPGMNTYKIAKKFAKILNDPEETKLVCVVESW 53
+ + +G+++ EI ++TY A+I + E L ++E +
Sbjct 27 HYDEKGRVVLDEIGRIDTY------AEIQSHAESVDLHVLMERY 64
> Gokush_gi|19387569|ref|NP_598320.1|_capsid_protein_[Spiroplasma_phage_4]
Length=553
Score = 18.9 bits (37), Expect = 8.9, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 15/24 (63%), Gaps = 1/24 (4%)
Query 18 IEREIPGMNTYKIA-KKFAKILND 40
I ++PG+ + + +AKI+ND
Sbjct 136 ITPKVPGIRVKSLRFRAYAKIIND 159
Lambda K H a alpha
0.309 0.129 0.365 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3608789