bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-16_CDS_annotation_glimmer3.pl_2_9

Length=59
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Gokush_Human_feces_E_009_Microviridae_AG0283_putative.VP2           22.3    0.29


> Gokush_Human_feces_E_009_Microviridae_AG0283_putative.VP2
Length=294

 Score = 22.3 bits (46),  Expect = 0.29, Method: Composition-based stats.
 Identities = 6/10 (60%), Positives = 9/10 (90%), Gaps = 0/10 (0%)

Query  45   YFKRNYPNTS  54
            Y ++NYPNT+
Sbjct  249  YLRKNYPNTT  258



Lambda      K        H        a         alpha
   0.330    0.146    0.410    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3629248