bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-20_CDS_annotation_glimmer3.pl_2_1
Length=79
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_gut_33_023_Microviridae_AG0366_putative.VP1 25.4 0.047
Gokush_Human_feces_B_068_Microviridae_AG0331_putative.VP1 22.3 0.65
Alpavirinae_Human_feces_B_007_Microviridae_AG067_putative.VP4 22.3 0.74
Gokush_Human_gut_33_018_Microviridae_AG0171_putative.VP1 21.9 0.90
Gokush_Human_feces_C_031_Microviridae_AG0433_putative.VP1 21.6 1.2
Gokush_Human_feces_E_007_Microviridae_AG0412_putative.VP1 21.6 1.2
Gokush_Human_feces_E_010_Microviridae_AG0120_putative.VP1 21.2 1.7
Gokush_Human_gut_21_019_Microviridae_AG0380_putative.VP1 20.8 2.1
Gokush_Human_gut_37_015_Microviridae_AG033_putative.VP1 20.8 2.1
Gokush_Human_gut_36_019_Microviridae_AG0279_putative.VP1 20.8 2.1
> Gokush_Human_gut_33_023_Microviridae_AG0366_putative.VP1
Length=533
Score = 25.4 bits (54), Expect = 0.047, Method: Composition-based stats.
Identities = 15/54 (28%), Positives = 23/54 (43%), Gaps = 0/54 (0%)
Query 1 MKRKFYGTVKIQRFFGIKAGRSVWTDAYVHTRHYDTEFEAREALVFLVDSVLPA 54
M+R Y + Q F + ++ + Y T F+A + VD VLPA
Sbjct 1 MQRSVYCGKRKQHLFSEIPRAGIQRSSFDRSHGYKTTFDAGYLIPAFVDEVLPA 54
> Gokush_Human_feces_B_068_Microviridae_AG0331_putative.VP1
Length=547
Score = 22.3 bits (46), Expect = 0.65, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 0/26 (0%)
Query 34 YDTEFEAREALVFLVDSVLPATRVKI 59
Y T F + + F VD VLP I
Sbjct 12 YKTTFNVGQIIPFYVDEVLPGDTFSI 37
> Alpavirinae_Human_feces_B_007_Microviridae_AG067_putative.VP4
Length=515
Score = 22.3 bits (46), Expect = 0.74, Method: Composition-based stats.
Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
Query 21 RSVWTDAYVHTRHY 34
R W +AY H R Y
Sbjct 409 RKKWAEAYSHVREY 422
> Gokush_Human_gut_33_018_Microviridae_AG0171_putative.VP1
Length=577
Score = 21.9 bits (45), Expect = 0.90, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 0/26 (0%)
Query 34 YDTEFEAREALVFLVDSVLPATRVKI 59
Y T +A + F VD VLP K+
Sbjct 34 YKTTMDAGYLIPFFVDEVLPGDTFKL 59
> Gokush_Human_feces_C_031_Microviridae_AG0433_putative.VP1
Length=529
Score = 21.6 bits (44), Expect = 1.2, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 0/26 (0%)
Query 34 YDTEFEAREALVFLVDSVLPATRVKI 59
Y T F + + F VD VLP K+
Sbjct 31 YKTTFNSGYLVPFYVDEVLPGDSFKL 56
> Gokush_Human_feces_E_007_Microviridae_AG0412_putative.VP1
Length=573
Score = 21.6 bits (44), Expect = 1.2, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 12/19 (63%), Gaps = 0/19 (0%)
Query 36 TEFEAREALVFLVDSVLPA 54
T F+A + + F VD VLP
Sbjct 30 TTFDAGKLIPFYVDEVLPG 48
> Gokush_Human_feces_E_010_Microviridae_AG0120_putative.VP1
Length=538
Score = 21.2 bits (43), Expect = 1.7, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 0/26 (0%)
Query 34 YDTEFEAREALVFLVDSVLPATRVKI 59
Y T F + + F VD VLP K+
Sbjct 31 YKTTFNSGFLVPFYVDEVLPGDSFKL 56
> Gokush_Human_gut_21_019_Microviridae_AG0380_putative.VP1
Length=563
Score = 20.8 bits (42), Expect = 2.1, Method: Composition-based stats.
Identities = 9/26 (35%), Positives = 13/26 (50%), Gaps = 0/26 (0%)
Query 34 YDTEFEAREALVFLVDSVLPATRVKI 59
Y T F A + + VD VLP ++
Sbjct 14 YKTTFNAGKLIPVFVDEVLPGDTARM 39
> Gokush_Human_gut_37_015_Microviridae_AG033_putative.VP1
Length=582
Score = 20.8 bits (42), Expect = 2.1, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 0/29 (0%)
Query 31 TRHYDTEFEAREALVFLVDSVLPATRVKI 59
+ Y T ++ + F VD VLP K+
Sbjct 31 SHDYKTTLDSGYLIPFFVDEVLPGDTFKL 59
> Gokush_Human_gut_36_019_Microviridae_AG0279_putative.VP1
Length=582
Score = 20.8 bits (42), Expect = 2.1, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 0/29 (0%)
Query 31 TRHYDTEFEAREALVFLVDSVLPATRVKI 59
+ Y T ++ + F VD VLP K+
Sbjct 31 SHDYKTTLDSGYLIPFFVDEVLPGDTFKL 59
Lambda K H a alpha
0.328 0.143 0.441 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3715071