bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-20_CDS_annotation_glimmer3.pl_2_4
Length=760
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_B_007_Microviridae_AG068_putative.VP1 950 0.0
Alpavirinae_Human_gut_21_005_Microviridae_AG016_putative.VP1 387 5e-124
Alpavirinae_Human_feces_C_010_Microviridae_AG0199_putative.VP1 379 3e-121
Pichovirinae_59_Coral_002_Microviridae_AG0339_putative.VP1 128 4e-33
Pichovirinae_JCVI_003_Microviridae_AG0344_putative.VP1 111 1e-27
Gokush_Bourget_504_Microviridae_AG0256_putative.VP1 111 2e-27
Gokush_JCVI_001_Microviridae_AG025_putative.VP1 109 7e-27
Pichovirinae_Pavin_279_Microviridae_AG0271_putative.VP1 109 8e-27
Gokush_Bourget_224_Microviridae_AG0245_putative.VP1 109 8e-27
Pichovirinae_Pavin_723_Microviridae_AG0327_putative.VP1 109 8e-27
> Alpavirinae_Human_feces_B_007_Microviridae_AG068_putative.VP1
Length=780
Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/810 (62%), Positives = 593/810 (73%), Gaps = 80/810 (10%)
Query 1 MASVFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFM 60
M+SVFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSS+RIKPEFGLRFM
Sbjct 1 MSSVFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSVRIKPEFGLRFM 60
Query 61 PMMFPIQTKMKAYLSFYKVPLRTLWKDYMDFISSDNTEEYEPPYMNFSVNDYNEGGALSP 120
PMMFPIQTKMKAYLSF+KVPLRTLWKDYMDFIS+DNTEEY+PP++ FS G + S
Sbjct 61 PMMFPIQTKMKAYLSFFKVPLRTLWKDYMDFISADNTEEYQPPFIKFS------GKSFSE 114
Query 121 SGLGDYFGIPTNQQVSSTPIGDFAVQFSQSKFDVDGHILRVNLNGSLNDAGVLTEGDLKD 180
G +S + +GD+ + S D + ++ V G+L D+ T+G
Sbjct 115 GG-----------ALSESGLGDY-IGMPVSNIDTNWQVMDV---GTLIDS---TKG--AT 154
Query 181 GLTVSGTCNNGLTELAFVPLVSEYTGKSELYKSQAVFLNFTFWLELRTNTT--NPVLELY 238
+ S T L EL F V +Y + Q + + + ++ + + + +P++ Y
Sbjct 155 AVFGSATKQGDLPELRFS--VMQYVNGP--FTPQISYSDNSCYMPIGNDYSFFSPIITFY 210
Query 239 -------KKCFGFEFISSINIPPTTS--PGQSPIDRVPMSPAQVVI----RQSPIN---- 281
F ++ S+NI T++ + ++ S V++ +Q+P
Sbjct 211 FTKEMMDAGTFRIKWTGSLNIEGTSARQTAEQFVNFTKCSKTPVILTFKKKQTPAPVGDI 270
Query 282 ----DGMTRIT---------ARVRIKGYIDAFGNISSKLYLAVRQASQF----------- 317
D +++ R+K +A NI++ + + + F
Sbjct 271 GLPFDASQKVSFFEPFYVSDTIYRVKFSFEATFNIANFPGMGINEDDAFSLGFTGSIYDI 330
Query 318 ------WNSESNNHTLRFNYVGFDDFSVTNYYAGV-TPYYGVGSTDHKAIKISAYPFRAY 370
S N T +N G +G+ TPYY V +T KAIK+SAYPFRAY
Sbjct 331 FNLGGKLGSTDVNLTFSYNASGDSSLVFARPVSGISTPYYSVYNTTEKAIKVSAYPFRAY 390
Query 371 EAVYNAYIRNTRNNPFILNGKKTYNRFITNDAGGADSLTPKSLFYANWQSDAYTSALTAP 430
+A+YNAYIRNTRNNPFILNGKKTYNR+IT D GG DSLTP L YANWQSDAYT+ALTAP
Sbjct 391 QAIYNAYIRNTRNNPFILNGKKTYNRWITTDEGGEDSLTPLDLLYANWQSDAYTTALTAP 450
Query 431 QQGIAPLVGLTTYETKSINEAGHEVTVVNTAIVDEDGNAFKVDFESNGEALKGVNYTPLK 490
QQG+APLVGLTTYE+ S+N+AGH VT VNTAIVDEDGNA+KVDFESNGEALKGVNYTPLK
Sbjct 451 QQGVAPLVGLTTYESVSLNDAGHTVTTVNTAIVDEDGNAYKVDFESNGEALKGVNYTPLK 510
Query 491 AGEALNMQSLVSPVTSGISINDFRNVNAYQRYLELNQFRGFSYKEIIEGRFDVNVRYDAL 550
AGEA+NMQSLVSPVTSGISINDFRNVNAYQRYLELNQFRGFSYKEIIEGRFDVNVRYDAL
Sbjct 511 AGEAINMQSLVSPVTSGISINDFRNVNAYQRYLELNQFRGFSYKEIIEGRFDVNVRYDAL 570
Query 551 NMPEYLGGITRDIVVNPITQTVETSNTGAYVGALGSQAGLATCFGNTDGSISVFCDEESI 610
NMPEYLGGITRDIVVNPITQTVET++TG+YVG+LGSQAGLATCFGN+DGSISVFCDEESI
Sbjct 571 NMPEYLGGITRDIVVNPITQTVETTDTGSYVGSLGSQAGLATCFGNSDGSISVFCDEESI 630
Query 611 VIGVMHVIPMPVYDSLLPKWLTYRERLDSFNPEFDHIGYQPIYVRELAAVQARQFNVDPM 670
V+G+M+V+PMPVYDS+LPKWLTYRERLDSFNPEFDHIGYQPIY++ELAA+QA + D
Sbjct 631 VMGIMYVMPMPVYDSILPKWLTYRERLDSFNPEFDHIGYQPIYLKELAAIQAFESGKDLN 690
Query 671 TVFGYQRPWYEYVQKPDRAHGLFLSSLRNFIMYRSFVDVPELGKDFTTMKPGDVNNVFSV 730
TVFGYQRPWYEYVQK DRAHGLFLSSLRNFIM+RSF + PELGK FT M+PG VNNVFSV
Sbjct 691 TVFGYQRPWYEYVQKVDRAHGLFLSSLRNFIMFRSFENAPELGKSFTVMQPGSVNNVFSV 750
Query 731 TEVGDKILGQIHFDCTAQLPISRVVVPRLE 760
TEV DKILGQIHFDCTAQLPISRVVVPRLE
Sbjct 751 TEVSDKILGQIHFDCTAQLPISRVVVPRLE 780
> Alpavirinae_Human_gut_21_005_Microviridae_AG016_putative.VP1
Length=742
Score = 387 bits (993), Expect = 5e-124, Method: Compositional matrix adjust.
Identities = 202/443 (46%), Positives = 284/443 (64%), Gaps = 25/443 (6%)
Query 332 VGFDDFSVTNYYAGVTPYYGVGSTDHKAIKISAYPFRAYEAVYNAYIRNTRNNPFILNGK 391
+ FDDF + AG Y ++ AY FRAYEAVYNAY R+ RNNPF++NG+
Sbjct 311 ITFDDFPFKSQEAGTKSY----------PRLLAYRFRAYEAVYNAYYRDIRNNPFVVNGR 360
Query 392 KTYNRFITNDAGGADSLTPKSLFYANWQSDAYTSALTAPQQGI-APLVGLTTYETKSINE 450
YN+++ GGAD T L NW+ D T+A+ PQQG APLVGLT + + +E
Sbjct 361 PVYNKWLPTMKGGADE-TMYQLHQCNWERDFLTTAVPNPQQGANAPLVGLTVGDVVTRSE 419
Query 451 AGHEVTVVNTAIVDEDGNAFKVDFE--SNGEALKGVNYTPLKAGE---ALN----MQSLV 501
G T +VDEDG+ + + ++ +GE L GV+Y P+ A+N + +L
Sbjct 420 DGTLSVQKQTVLVDEDGSKYGISYKVSEDGERLVGVDYDPVSEKTPVTAINSYAELAALA 479
Query 502 SPVTSGISINDFRNVNAYQRYLELNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITR 561
+ SG +I R VNAYQ++LELN +GFSYK+I++GR+D+++R+D L MPE++GGI+R
Sbjct 480 TEQGSGFTIETLRYVNAYQKFLELNMRKGFSYKQIMQGRWDIDIRFDELLMPEFIGGISR 539
Query 562 DIVVNPITQTVE---TSNTGAYVGALGSQAGLATCFGNTDGSISVFCDEESIVIGVMHVI 618
++ + + QTV+ S+ G Y ALGS+ G+A +G+T +I VFCDEES +IG++ V
Sbjct 540 ELSMRTVEQTVDQQSASSQGQYAEALGSKTGIAGVYGSTSNNIEVFCDEESYIIGLLTVT 599
Query 619 PMPVYDSLLPKWLTYRERLDSFNPEFDHIGYQPIYVRELAAVQARQFNVDPMT-VFGYQR 677
P+P+Y LLPK TY LD + PEFD IG+QPI +E+ + N++ M FGYQR
Sbjct 600 PVPIYSQLLPKDFTYNGLLDHYQPEFDRIGFQPITYKEVCPLNFDISNMNDMNKTFGYQR 659
Query 678 PWYEYVQKPDRAHGLFLSSLRNFIMYRSFVDVPELGKDFTTMKPGDVNNVFSVTEVGDKI 737
PWYEYV K D AHGLF + L+ F+M+R+F +P+LG+ F + P VN VFSVTE DKI
Sbjct 660 PWYEYVAKYDNAHGLFRTDLKKFVMHRTFSGLPQLGQQFLLVDPDTVNQVFSVTEYTDKI 719
Query 738 LGQIHFDCTAQLPISRVVVPRLE 760
G + F+ TA+LPISRV +PRL+
Sbjct 720 FGYVKFNATARLPISRVAIPRLD 742
Score = 142 bits (359), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 69/136 (51%), Positives = 92/136 (68%), Gaps = 3/136 (2%)
Query 3 SVFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFMPM 62
++F+ D N + NSFDWSH NN TTD GRITPVF ELVP S+RI PEFGL MPM
Sbjct 4 NIFDATFDANNRIDVNSFDWSHVNNLTTDFGRITPVFCELVPAKGSLRINPEFGLELMPM 63
Query 63 MFPIQTKMKAYLSFYKVPLRTLWKDYMDFISSDNTEEYEPPYMNFSVNDYNEGGALSPSG 122
+FP+QT+M A L+F+KV LR++W+DY DFI S+ ++ E PY+N S + + +
Sbjct 64 VFPVQTRMFARLNFFKVTLRSMWEDYSDFI-SNFRDDLEEPYINCSEISFPK--MFTTGS 120
Query 123 LGDYFGIPTNQQVSST 138
LGDY G+PT + S+
Sbjct 121 LGDYLGVPTRKSYHSS 136
> Alpavirinae_Human_feces_C_010_Microviridae_AG0199_putative.VP1
Length=731
Score = 379 bits (973), Expect = 3e-121, Method: Compositional matrix adjust.
Identities = 196/419 (47%), Positives = 272/419 (65%), Gaps = 24/419 (6%)
Query 361 KISAYPFRAYEAVYNAYIRNTRNNPFILNGKKTYNRFITNDAGGADSLTPKSLFYANWQS 420
++ AY FRAYE+VYNAY R+ RNNPF++NG+ YN+++ GGAD+ T L NW+
Sbjct 318 RLLAYRFRAYESVYNAYYRDIRNNPFVVNGRPVYNKWLPTMKGGADT-TLYELRQCNWER 376
Query 421 DAYTSALTAPQQGI-APLVGLTTYETKSINEAGHEVTVVNTAIVDEDGNAFKVDFE--SN 477
D T+A+ PQQG APLVGL + + +E G T +VDEDG+ + V ++ +
Sbjct 377 DFLTTAVPNPQQGANAPLVGLVMGDVVTRSEDGTYSVQKQTVLVDEDGSKYGVSYKVSED 436
Query 478 GEALKGVNYTPLKA-------GEALNMQSLVSPVTSGISINDFRNVNAYQRYLELNQFRG 530
GE L GV+Y P+ G + +L + SG +I R VNAYQ++LELN +G
Sbjct 437 GERLVGVDYDPVSEKTPVTAIGSYAELAALATEQGSGFTIETLRYVNAYQKFLELNMRKG 496
Query 531 FSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVET---SNTGAYVGALGSQ 587
FSYK+I++GR+D+++R+D L MPE++GGI+R++ + + QTV+ S+ G Y ALGS+
Sbjct 497 FSYKQIMQGRWDIDIRFDELLMPEFIGGISRELSMRTVEQTVDQQSGSSRGQYAEALGSK 556
Query 588 AGLATCFGNTDGSISVFCDEESIVIGVMHVIPMPVYDSLLPKWLTYRERLDSFNPEFDHI 647
G+A +G+T +I VFCDEES +IG++ V P+P+Y LLPK TY LD + PEFD I
Sbjct 557 TGIAGVYGSTSNNIEVFCDEESYIIGLLTVTPVPIYTQLLPKDFTYNGLLDHYQPEFDRI 616
Query 648 GYQPIYVREL------AAVQARQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFLSSLRNFI 701
G+QPI +E+ A A Q N FGYQRPWYEYV K D AHGLF ++++NFI
Sbjct 617 GFQPITYKEICPMNIVAGDSANQLN----KTFGYQRPWYEYVAKYDSAHGLFRTNMKNFI 672
Query 702 MYRSFVDVPELGKDFTTMKPGDVNNVFSVTEVGDKILGQIHFDCTAQLPISRVVVPRLE 760
M R F +P+LG+ F + P VN VFSVTE DKI G + F+ TA+LPISRV +PRL+
Sbjct 673 MSRVFSGLPQLGQQFLLVDPDTVNQVFSVTEYTDKIFGYVKFNATARLPISRVAIPRLD 731
Score = 137 bits (345), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/131 (52%), Positives = 88/131 (67%), Gaps = 9/131 (7%)
Query 4 VFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFMPMM 63
+F+ D N + NSFDWSH NN TTD GRITPVF ELVP S+RI PEFGL MPM+
Sbjct 5 IFDATFDANNRIDVNSFDWSHVNNLTTDFGRITPVFCELVPAKGSLRINPEFGLELMPMV 64
Query 64 FPIQTKMKAYLSFYKVPLRTLWKDYMDFISSDNTEEYEPPYM---NFSVNDYNEGGALSP 120
FP+QT+M A L+F+KV LR++W+DY DFI S+ ++ E PY+ +F + G+
Sbjct 65 FPVQTRMFARLNFFKVTLRSMWEDYSDFI-SNFRDDLEEPYILPDSFRFEKMCKTGS--- 120
Query 121 SGLGDYFGIPT 131
LGDY G+PT
Sbjct 121 --LGDYLGLPT 129
> Pichovirinae_59_Coral_002_Microviridae_AG0339_putative.VP1
Length=522
Score = 128 bits (322), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 171/408 (42%), Gaps = 52/408 (13%)
Query 362 ISAYPFRAYEAVYNAYIRNT----RNNPFILNGKKTYNRFITNDAGGADSLTPKSLFYAN 417
+SA PF AY+ +Y+ Y R+ + + + +G ++ GAD++ ++
Sbjct 133 VSALPFAAYQKIYDDYYRDENLIDKVDITLSDGTQS----------GADAIELGTMRKRA 182
Query 418 WQSDAYTSALTAPQQGIAPLVGLTTYE--TKSINEAGHEVTVVNTAIVDEDGNAFKVDFE 475
WQ D +TSAL Q+G + L T T S N A + NT+ GN
Sbjct 183 WQHDYFTSALPWTQRGPEATIPLGTSAPITWSNNTATATIVRNNTS-----GNPIAGYTF 237
Query 476 SNGEALKGVNYTPLKAGEALNMQSLVSPVT----------------SGISINDFRNVNAY 519
AL YT G + L +PV+ + SIND R
Sbjct 238 DGASAL----YT---GGSGQLIADLPTPVSLDFDNSDHLFADLAGATASSINDLRRAFRL 290
Query 520 QRYLELNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETSNTGA 579
Q +LE N G Y EII F V L PE+LGG I I++ ++TS
Sbjct 291 QEWLERNARGGARYIEIIMAHFGVRSSDARLQRPEFLGGSATPIT---ISEVLQTSANNT 347
Query 580 YVGALGSQAGLATCFGNTDGSISVFCDEESIVIGVMHVIPMPVYDSLLPKWLTYRERLDS 639
G+ AG G+++ +S C+E +IG+M V+P Y +PK ++ D
Sbjct 348 EPTPQGNMAGHGVSVGSSN-YVSYKCEEHGYIIGIMSVMPKTAYQQGIPKHFKKLDKFDY 406
Query 640 FNPEFDHIGYQPIYVRELAAVQARQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFLSSLRN 699
+ P F +IG QPI EL Q N FGY + EY P HG F SL
Sbjct 407 YWPSFANIGEQPILNEEL----YHQNNATDTETFGYTPRYAEYKYIPSTVHGEFRDSLDF 462
Query 700 FIMYRSFVDVPELGKDFTTMKPGDVNNVFSVTEVGDKILGQIHFDCTA 747
+ M R F P L +DF DV VF+VT + + +H + A
Sbjct 463 WHMGRIFGSKPTLNQDFIECNADDVERVFAVTAGQEHLYVYLHNEVKA 510
Score = 74.7 bits (182), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 4/143 (3%)
Query 3 SVFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFMPM 62
S+F+K+ + + N+FD SHD F+ +G + P+ P IK RF P+
Sbjct 2 SIFSKVAMPR--PQTNTFDLSHDRKFSGKIGELMPITVMEAVPGDKFNIKATNLTRFAPL 59
Query 63 MFPIQTKMKAYLSFYKVPLRTLWKDYMDFISSDNTEEYEPPYMNFSVNDYNEGGALSPSG 122
+ PI + Y F+ VP R LW ++ DFIS +P + ++ G A+
Sbjct 60 ITPIMHQASVYCHFFFVPNRILWSNWEDFISGGEDGLADPTFPTINITTPTNGYAV--GA 117
Query 123 LGDYFGIPTNQQVSSTPIGDFAV 145
L DY G+PT Q+ FA
Sbjct 118 LADYLGLPTGTQIDGVSALPFAA 140
> Pichovirinae_JCVI_003_Microviridae_AG0344_putative.VP1
Length=505
Score = 111 bits (278), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/422 (28%), Positives = 177/422 (42%), Gaps = 55/422 (13%)
Query 343 YAGVTPYYGVGSTDHKAIKISAYPFRAYEAVYNAYIRNTRNNPFILNGKKTYNRFITNDA 402
Y G+ P +T +SA PF AY+ VYN + R+ L + Y + N
Sbjct 120 YLGIPP-----NTAGVPTNVSALPFAAYQCVYNEWYRDQN-----LVAEVPYQ--LINGP 167
Query 403 GGADSLTPKSLFYANWQSDAYTSALTAPQQGIAPLVGLTTYETKSINEAGHEVTVVNTAI 462
+L L ++ D +TSAL Q+G A + L ++T+ +
Sbjct 168 NPRTNLAVMRL--RAFEHDYFTSALPFAQKGNAVDIPLG------------DITLNSDWY 213
Query 463 VDEDGNAFKVDFESNGEALKGVNYTPLKAGEALNMQSLVSPVT---------SGISINDF 513
+D G+ K++ S G + G N T A +N+ S P + +I D
Sbjct 214 LD--GSVPKLE-NSTGGYVSG-NVTSDNATGEINVGSDNDPFAYDPDGSLEVTSTTITDL 269
Query 514 RNVNAYQRYLELNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVE 573
R Q +LEL G Y E I+ FDV L PEY+ G + ++++ I T
Sbjct 270 RRAFKLQEWLELLARGGSRYIEQIKTFFDVKSSDQRLQRPEYITGTKQPVIISEILNT-- 327
Query 574 TSNTGAYVGALGSQAGLATCFGNTDGSISVFCDEESIVIGVMHVIPMPVYDSLLPKWLTY 633
T T S G+A GN +C+E +IG++ V P Y +PK
Sbjct 328 TGETAGLPQGNMSGHGVAVGTGNVG---KYYCEEHGFIIGILSVTPNTAYQQGIPKHYLR 384
Query 634 RERLDSFNPEFDHIGYQPIYVRELAAVQARQFNVDPM--TVFGYQRPWYEYVQKPDRAHG 691
++ D + P+F HIG QPI E+ A DP FGY + EY P R G
Sbjct 385 TDKYDFYWPQFAHIGEQPIVNNEIYA-------YDPTGDETFGYTPRYAEYKYMPSRVAG 437
Query 692 LFLSSLRNFIMYRSFVDVPELGKDFTTMKPGDVNNVFSVTEVGDKILGQIHFDCTA--QL 749
F SSL + R F +P L +DF + D + +F+VT+ D + + A Q+
Sbjct 438 EFRSSLDEWHAARIFSSLPTLSQDFIEVDADDFDRIFAVTDGDDNLYMHVLNKVKARRQM 497
Query 750 PI 751
P+
Sbjct 498 PV 499
Score = 63.9 bits (154), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/153 (25%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query 2 ASVFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFMP 61
A +FN++ VK + + N+FD +HD + +G + P+ P +I + + ++F P
Sbjct 4 AQLFNRVS-VKKE-RYNTFDLTHDVKMSGRMGELLPIMNLECIPGDNITLGADSMVKFAP 61
Query 62 MMFPIQTKMKAYLSFYKVPLRTLWKDYMDFISSDNTEEYEPPYMNFSVNDYNEGGALSPS 121
++ P+ + + ++ VP R +W + DF++ +T PP F + + N G +
Sbjct 62 LLAPVMHRFNVTMHYFFVPNRIIWDGWEDFMTDVDT----PP--AFPIIEVNSGWTAAQQ 115
Query 122 GLGDYFGIPTN-----QQVSSTPIGDFAVQFSQ 149
DY GIP N VS+ P + +++
Sbjct 116 RFADYLGIPPNTAGVPTNVSALPFAAYQCVYNE 148
> Gokush_Bourget_504_Microviridae_AG0256_putative.VP1
Length=536
Score = 111 bits (278), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 171/403 (42%), Gaps = 33/403 (8%)
Query 368 RAYEAVYNAYIRNTRNNPFILNGKKTYNRFITNDAGGADSLTPKSLFYANWQSDAYTSAL 427
RAY +YN + R+ + N + + G D++T L + D +TSAL
Sbjct 152 RAYNLIYNEWFRD----------ENLQNSVVVDTDDGPDTVTDYVLRRRGKRKDYFTSAL 201
Query 428 TAPQQGIA---PLVGLTTYETKSINEAGHEVT--VVNTAIVDEDGNAFKVDFESNGEALK 482
PQ+G A PL + ++I+ +G +T V+ + D D A + G +
Sbjct 202 PWPQKGDAVTLPLGSSAPVKFQNISGSGTALTGRVIEFSGRDNDTPAI-YSAPNYGSSTG 260
Query 483 GVNYTPLKAGEALNMQSLVSPVTSGISINDFRNVNAYQRYLELNQFRGFSYKEIIEGRFD 542
N L + + N+ + +S TS +IN R Q+ LE + G Y EII F
Sbjct 261 NAN---LPSANSANLYADLSAATSA-TINQLRQSFQIQKLLERDARGGTRYTEIIRSHFG 316
Query 543 VNVRYDALNMPEYLGGITRDIVVNPITQTVETSNTGAYVGALGSQAGLATCFGNTDGSIS 602
V L PEY+GG + +I +NPI QT TS +G LG+ A + T + G +
Sbjct 317 VISPDARLQRPEYIGGGSTNININPIAQTSGTSASGT-TTPLGTLASMGTALAHNHG-FT 374
Query 603 VFCDEESIVIGVMHVIPMPVYDSLLPKWLTYRERLDSFNPEFDHIGYQPIYVRELAAVQA 662
E ++IG++ V Y L + + R D + P F +G Q + +E+
Sbjct 375 YSSTEHGVIIGMVSVRADLTYQQGLQRMWSRSTRYDFYFPAFATLGEQAVLNKEIYVTGG 434
Query 663 RQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFLSSLRNFI----MYRSFVDVPELGKDFTT 718
N VFGYQ W EY P R LF S+ I + + F VP L F
Sbjct 435 SGDN----DVFGYQERWAEYRYYPSRISSLFRSTAAGTIDAWHLAQKFTSVPTLNTTFIQ 490
Query 719 MKPGDVNNVFSV--TEVGDKILGQIHFDCTAQLPISRVVVPRL 759
P V+ V +V + G + + FD P+ VP L
Sbjct 491 DTP-PVSRVVAVGASANGQQFIFDSFFDVKKARPMPMYSVPGL 532
Score = 51.2 bits (121), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/127 (26%), Positives = 55/127 (43%), Gaps = 2/127 (2%)
Query 12 KNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFMPMMFPIQTKMK 71
K D+ R+SFD + T D G + PV+ + + P + R+ R ++PI M
Sbjct 17 KADIPRSSFDCQSTHKTTFDAGYLVPVYVDEMLPGDTFRLNMTAFARLATPLYPIMDNMH 76
Query 72 AYLSFYKVPLRTLWKDYMDFISSDNTEEYEPPYMNFSVNDYNEGGALSPSGLGDYFGIPT 131
F+ VP R +W ++ F+ Y+ + G + L DY G+PT
Sbjct 77 LDSFFFFVPNRLIWDNWQKFMGQQTNPGDSISYV--VPQQVSPTGGYAIGSLQDYMGLPT 134
Query 132 NQQVSST 138
QV ++
Sbjct 135 VGQVGNS 141
> Gokush_JCVI_001_Microviridae_AG025_putative.VP1
Length=560
Score = 109 bits (273), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 118/428 (28%), Positives = 174/428 (41%), Gaps = 46/428 (11%)
Query 355 TDHKAIKISAYPFRAYEAVYNAYIRNTRNNPFILNGKKTYNRFITNDAGGADSLTPKSLF 414
T + + SA P RA +YN + R+ + N N G D T SLF
Sbjct 152 TAGQTVSHSALPLRALNLIYNEWFRD----------ENLQNSLTVNRDDGPDLYTDYSLF 201
Query 415 YANWQSDAYTSALTAPQQGIAPLVGLTT----YETKS------------INEAGHEVTVV 458
+ D +TSAL PQ+G A + L T Y T S + +T
Sbjct 202 RRGKRHDYFTSALPWPQKGAAVTLPLGTSAPVYGTGSSLSLYDGTNLFGMYSQNTNLTTG 261
Query 459 NTAIVDEDGNAFKVDFESNGEALKGVNYTPLKAGEA-LNMQSLVSPVTSGISINDFRNVN 517
+A+ ++ V G ++GV+ A + + +S T+ +IN R
Sbjct 262 RSAVYNQPAGTVAV-----GGTVQGVDKALGVATSGDTGIYADLSAATAA-TINQLRESF 315
Query 518 AYQRYLELNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETSNT 577
QR LE + G Y EII F V L PEYLGG + + ++PI QT T+ +
Sbjct 316 QIQRLLERDARGGTRYTEIIRSHFGVISPDARLQRPEYLGGGSTPVNISPIAQTSATA-S 374
Query 578 GAYVGALGSQAGLATCFGNTDGSISVFCDEESIVIGVMHVIPMPVYDSLLPKWLTYRERL 637
GA LG+ A + T G F E VIG++ V Y + K + R R
Sbjct 375 GATATPLGNLAAMGTALAMGHGFTQSFV-EHGHVIGLVAVRADLTYQQGMRKMWSRRTRY 433
Query 638 DSFNPEFDHIGYQPIYVRELAAVQARQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFLS-- 695
D + P F H+G Q + +E+ + VFGYQ W EY P + LF S
Sbjct 434 DFYFPVFAHLGEQAVLNKEIYTTGTSTDD----DVFGYQERWAEYRYHPSQITSLFRSTA 489
Query 696 --SLRNFIMYRSFVDVPELGKDFTTMKPGDVNNVFSVTEV--GDKILGQIHFDCTAQLPI 751
+L + + ++F +P L F P V+ V ++ G + + FD A P+
Sbjct 490 AGTLDAWHLAQNFSSLPTLNTSFIQDNP-PVDRVVAIGAEANGQQFIFDSFFDIKAARPM 548
Query 752 SRVVVPRL 759
VP L
Sbjct 549 PLYSVPGL 556
Score = 43.9 bits (102), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 6/128 (5%)
Query 12 KNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFMPMMFPIQTKMK 71
+ D+ R+SF + T D G + P++ + V P + +K R +FP+ M
Sbjct 30 RADIPRSSFQIQTAHKTTFDSGYLIPIYCDEVLPGDTFNVKMTAFARLATPLFPVMDNMY 89
Query 72 AYLSFYKVPLRTLWKDYMDFISSDNTEEYEP-PYMNFSV-NDYNEGGALSPSGLGDYFGI 129
F+ VP R +W ++ F+ E+ +P +++ + G + + DY +
Sbjct 90 LDSFFFFVPNRLVWDNWQKFMG----EQVDPGDSISYVIPQTVTPEGGYAIGSIQDYLAL 145
Query 130 PTNQQVSS 137
PT QV++
Sbjct 146 PTVGQVTA 153
> Pichovirinae_Pavin_279_Microviridae_AG0271_putative.VP1
Length=503
Score = 109 bits (272), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 115/417 (28%), Positives = 173/417 (41%), Gaps = 50/417 (12%)
Query 355 TDHKAIKISAYPFRAYEAVYNAYIRNTRNNPFILNGKKTYNRFITNDAGGADSLTPKSLF 414
T ++I+A PF AY+A+YN Y R+ L YN N G T +L
Sbjct 125 TGATQVQINALPFAAYQAIYNEYYRDEN-----LVTAVNYNLADGNQGIG----TFGTLR 175
Query 415 YANWQSDAYTSALTAPQQGIA---PLVGLTTYET-------KSINEAGHEVTVVNTAIVD 464
++ D +T+ L Q+G A PL +T K +N AG + ++ D
Sbjct 176 KRAYEHDYFTACLPFAQKGAAVDLPLGDVTLKANWNPSAIPKFVNAAGTSINNLD----D 231
Query 465 EDGNAFKVDFESNGEALKGVNYTPLKAGEALNMQSLVSPVTSGISINDFRNVNAYQRYLE 524
G S G++ + Y P + E +IND R Q +LE
Sbjct 232 VQGGTPNRIRTSGGQS--PIAYNPNGSLEV-----------GSTTINDLRRAMRLQEFLE 278
Query 525 LNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETSNTGAYVGAL 584
N G Y E I+ F V L PEY+ G +VV IT TV+
Sbjct 279 KNARGGTRYIENIKMHFGVQSSDSRLQRPEYITGTKAPVVVQEITSTVKGIEE-----PQ 333
Query 585 GSQAGLATCFGNTD-GSISVFCDEESIVIGVMHVIPMPVYDSLLPKWLTYRERLDSFNPE 643
G+ G AT + G+ SV +E +IG+M ++P P Y +PK + LD + P
Sbjct 334 GNPTGKATSLQSGHYGNYSV--EEHGYIIGIMSIMPKPAYQQGIPKSYLKTDVLDFYWPS 391
Query 644 FDHIGYQPIYVRELAAVQARQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFLSSLRNFIMY 703
F +IG Q + E+ + P VFGY + EY +R GLF ++L + +
Sbjct 392 FANIGEQEVLQEEIYG-----YTPTPNAVFGYIPRYAEYKYLQNRVCGLFRTTLDFWHLG 446
Query 704 RSFVDVPELGKDFTTMKPGDVNNVFSVTE-VGDKILGQIHFDCTAQLPISRVVVPRL 759
R F ++P L + F + P + +F+ E D I + TA+ P+ P L
Sbjct 447 RIFANIPTLSQSFIEVSPANQTRIFANQEDYDDNIYIHVLNKMTARRPMPVFGTPML 503
Score = 57.8 bits (138), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (43%), Gaps = 22/188 (12%)
Query 1 MASVFNKIGDVKNDVKR---NSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGL 57
M ++FN I +V R N+FD +HD T +G + P P I + L
Sbjct 1 MDNLFNSI-----EVTRPPSNTFDLTHDVKMTGGMGNLMPCCIAECVPGDKWNISGDTYL 55
Query 58 RFMPMMFPIQTKMKAYLSFYKVPLRTLWKDYMDFISSDNTEEYEPPYMNFSVNDYNEGGA 117
RF P+ PI + + ++ VP R LW ++ FI ++ P ++
Sbjct 56 RFAPITAPIMHSIDVAIHYFFVPNRILWSNWEKFIVNE-------PTGGIPTFSWDANIP 108
Query 118 LSPSGLGDYFGIP------TNQQVSSTPIGDFAVQFSQSKFDVDGHILRVNLNGSLNDAG 171
+ LGDY +P T Q+++ P + +++ D + + VN N + + G
Sbjct 109 ATAKKLGDYLSVPPPPTGATQVQINALPFAAYQAIYNEYYRD-ENLVTAVNYNLADGNQG 167
Query 172 VLTEGDLK 179
+ T G L+
Sbjct 168 IGTFGTLR 175
> Gokush_Bourget_224_Microviridae_AG0245_putative.VP1
Length=536
Score = 109 bits (273), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 119/427 (28%), Positives = 175/427 (41%), Gaps = 33/427 (8%)
Query 343 YAGVTPYYGVGSTDHKAIKISAYPFRAYEAVYNAYIR--NTRNNPFILNGKKTYNRFITN 400
Y G+ VG+++ + SA P RAY +YN + R N +N+ + G
Sbjct 129 YLGLPTVGQVGNSN--TVSHSALPTRAYNLIYNQWFRDENLQNSVTVDKG---------- 176
Query 401 DAGGADSLTPKSLFYANWQSDAYTSALTAPQQGIAPL-VGLTTYETKSINE-AGHEVTVV 458
D A++ T ++ + D +T AL PQ+G P+ + + T+ N+ AG
Sbjct 177 DGPDANASTNYTILRRGKRHDYFTGALPWPQKGGTPVTIPIGTFAPVLWNKYAGSPSNFN 236
Query 459 NT-AIVDEDGNAFKVDFESNGEALKGVNYTPLKAGEALNMQSLVSPVTSGISINDFRNVN 517
NT A+ ++ A + + G T L G+ + + +S T+ ++IN R
Sbjct 237 NTNAVFEQQVTAADLRYAPT----YGGASTALAPGDVGGLYTDLSNATA-VTINQLRQSF 291
Query 518 AYQRYLELNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETSNT 577
Q+ LE + G Y EI+ F V L PEYLGG T I ++PI QT T +
Sbjct 292 QIQKLLERDARGGTRYTEILRSHFGVTSPDARLQRPEYLGGGTTPISISPIAQTSGTGTS 351
Query 578 GAYVGALGSQAGLATCFGNTDGSISVFCDEESIVIGVMHVIPMPVYDSLLPKWLTYRERL 637
G G+ A + T G F E VIGV+ V Y L + + R
Sbjct 352 GQTT-PQGNLAAMGTYLAKGHGFSQSFV-EHGYVIGVVSVRADLTYQQGLRRHWSRSTRY 409
Query 638 DSFNPEFDHIGYQPIYVRELAAVQARQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFLSSL 697
D + P F +G Q I +E+ N VFGYQ W EY P GLF S+
Sbjct 410 DYYFPAFAMLGEQSILNKEIYVTGGSLDN----DVFGYQERWAEYRYNPSEITGLFRSTA 465
Query 698 RNFI----MYRSFVDVPELGKDFTTMKPGDVNNV-FSVTEVGDKILGQIHFDCTAQLPIS 752
I + F +P L F P N+ + G + L FD A P+
Sbjct 466 AGTIDPWHYAQKFTSLPTLNTTFIQDNPPLARNLAVGASANGQQFLLDAFFDINAARPLP 525
Query 753 RVVVPRL 759
VP L
Sbjct 526 MYSVPGL 532
Score = 45.1 bits (105), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (43%), Gaps = 14/133 (11%)
Query 12 KNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFMPMMFPIQTKMK 71
+ D+ R+ F T D G + P+ E V P + + R +FP+ +
Sbjct 17 RADIPRSRFSMQKTLKTTFDSGYLVPIMCEEVLPGDTFNVNVTMFGRLATPIFPVMDNLH 76
Query 72 AYLSFYKVPLRTLWKDYMDFISSDNTEEYEPPYMNFSVNDYNEGGALSPSG------LGD 125
F+ VP R +W +++ F+ E E P + S Y +SP+G L D
Sbjct 77 LDSFFFFVPNRLVWNNWVKFMG-----EQENPSDSIS---YTIPQQVSPTGGYAIGSLQD 128
Query 126 YFGIPTNQQVSST 138
Y G+PT QV ++
Sbjct 129 YLGLPTVGQVGNS 141
> Pichovirinae_Pavin_723_Microviridae_AG0327_putative.VP1
Length=508
Score = 109 bits (272), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 167/399 (42%), Gaps = 36/399 (9%)
Query 343 YAGVTPYYGVGSTDHKAIKISAYPFRAYEAVYNAYIRNTRNNPFILNGKKTYNRFITNDA 402
Y G+ P G + + +SA P AY+ +YN Y R+ +N ++ K T T DA
Sbjct 120 YIGIPPVPAGGVSTN----VSALPMAAYQCIYNEYYRD-QNLQTPVDYKLTDGNNNT-DA 173
Query 403 GGADSLTPKSLFYANWQSDAYTSALTAPQQGIAPLVGLTTYETK-SINEAGHEVTVVNTA 461
G + LT +L W+ D +T++L Q+G A + + T + ++N E
Sbjct 174 GDRERLT--TLRQRAWEHDYFTASLPFAQKGAAVDIPIGTIDKDVAVNFNSLEFGATTVR 231
Query 462 IVDEDGNAFKVDFESNGEALKGVNYTPLKAGEALNMQSLVSPVTSGISINDFRNVNAYQR 521
DG + G + TP + + + P T IND R Q
Sbjct 232 YNSADGL-----IDIGGSNAVNADGTPTMIAKTSTID--IEPTT----INDLRRAFKLQE 280
Query 522 YLELNQFRGFSYKEIIEGRFDVNVRYDALNMPEYLGGITRDIVVNPITQTVETSNTGAYV 581
+LE N G Y E I F V L PEY+ G+ +VV+ E NT
Sbjct 281 WLEKNARGGTRYIENILTHFGVRSSDKRLQRPEYITGVKSPVVVS------EVLNTTGQD 334
Query 582 GAL--GSQAGLATCFGNTDGSISVFCDEESIVIGVMHVIPMPVYDSLLPKWLTYRERLDS 639
G L G+ AG + S S +C+E +IG+M V+P Y +P+ + LD
Sbjct 335 GGLPQGNMAGHGISV-TSGKSGSYYCEEHGYIIGIMSVMPKTAYQQGIPRTFLKTDSLDY 393
Query 640 FNPEFDHIGYQPIYVRELAAVQARQFNVDPMTVFGYQRPWYEYVQKPDRAHGLFLSSLRN 699
F P F +IG Q + +EL A + + FGY + EY P R G F +SL
Sbjct 394 FWPTFANIGEQEVAKQELYA-----YTANANDTFGYVPRYAEYKYMPSRVAGEFRTSLNY 448
Query 700 FIMYRSFVDVPELGKDFTTMKPGDVNNVFSVTEVGDKIL 738
+ + R F P L DF P +F+V + +L
Sbjct 449 WHLGRIFATEPSLNSDFIECDP--TKRIFAVEDPETDVL 485
Score = 79.0 bits (193), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 16/187 (9%)
Query 3 SVFNKIGDVKNDVKRNSFDWSHDNNFTTDLGRITPVFTELVPPNSSIRIKPEFGLRFMPM 62
++FN I N K+N FD +HD +T++G++TP+ T P + E +RF PM
Sbjct 4 NLFNSIQ--LNKPKKNVFDLTHDVKLSTNMGQLTPILTLECVPGDKFDLSCESLIRFAPM 61
Query 63 MFPIQTKMKAYLSFYKVPLRTLWKDYMDFISSDNTEEYEPPYMNFSVNDYNEGGALSPSG 122
+ P+ +M + ++ VP R LW ++ FI+ N+ E+ PYM ++ DY A+
Sbjct 62 IAPVMHRMDVTMHYFFVPNRILWSNWEKFITEHNS-EHVAPYMAYTNGDYT---AMQKKF 117
Query 123 LGDYFGIP------TNQQVSSTPIGDFAVQFSQSKFDVDGHILRVNLNGSLNDAGVLTEG 176
+ DY GIP + VS+ P+ + +++ D + L+ ++ L D T+
Sbjct 118 M-DYIGIPPVPAGGVSTNVSALPMAAYQCIYNEYYRDQN---LQTPVDYKLTDGNNNTDA 173
Query 177 DLKDGLT 183
++ LT
Sbjct 174 GDRERLT 180
Lambda K H a alpha
0.319 0.136 0.407 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 71456460