bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-21_CDS_annotation_glimmer3.pl_2_7
Length=107
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_feces_E_010_Microviridae_AG0121_putative.VP2 23.5 0.43
Microvirus_gi|89888105|ref|YP_512798.1|_gpH_[Enterobacteria_pha... 21.9 1.5
Microvirus_gi|9626383|ref|NP_040713.1|_minor_spike_protein_[Ent... 20.4 5.2
Alpavirinae_Human_feces_A_047_Microviridae_AG0312_putative.VP4 20.0 7.4
Alpavirinae_Human_gut_33_017_Microviridae_AG0152_putative.VP4 20.0 7.5
Gokush_gi|17402855|ref|NP_510879.1|_hypothetical_protein_PhiCPG... 20.0 7.9
Gokush_Human_feces_E_007_Microviridae_AG0413_putative.peptidase... 19.6 8.3
Alpavirinae_Human_feces_B_039_Microviridae_AG094_putative.VP2 19.6 9.0
Gokush_gi|77020121|ref|YP_338244.1|_putative_replication_protei... 19.6 10.0
> Gokush_Human_feces_E_010_Microviridae_AG0121_putative.VP2
Length=199
Score = 23.5 bits (49), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query 1 MAQAAYYYAAGETQKAEAKMLEVKKRTEEATAELRELQYWTEIAN--TIIKLAQVVG 55
+A A + A E ++A+AK +EV+ A EL++ Q TE+A + + AQ VG
Sbjct 72 VAGAMHSGADTELKEAQAKQVEVQNSALAADTELKKAQ--TEVAKEASTLTYAQAVG 126
> Microvirus_gi|89888105|ref|YP_512798.1|_gpH_[Enterobacteria_phage_ID18_sensu_lato]
Length=337
Score = 21.9 bits (45), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 7/12 (58%), Positives = 8/12 (67%), Gaps = 0/12 (0%)
Query 96 FKGVDKTVTTKW 107
F+GVDK V W
Sbjct 307 FRGVDKAVADTW 318
> Microvirus_gi|9626383|ref|NP_040713.1|_minor_spike_protein_[Enterobacteria_phage_phiX174_sensu_lato]
Length=328
Score = 20.4 bits (41), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
Query 96 FKGVDKTVTTKW 107
F G+DK V W
Sbjct 298 FHGIDKAVADTW 309
> Alpavirinae_Human_feces_A_047_Microviridae_AG0312_putative.VP4
Length=332
Score = 20.0 bits (40), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
Query 98 GVDKTVTTKW 107
G DK +T+KW
Sbjct 139 GTDKLITSKW 148
> Alpavirinae_Human_gut_33_017_Microviridae_AG0152_putative.VP4
Length=565
Score = 20.0 bits (40), Expect = 7.5, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 0/23 (0%)
Query 74 RMSETPPKNSTTVTQHFDPEMQF 96
R + KNST DPE++F
Sbjct 117 RSASVKLKNSTVERTFKDPEVRF 139
> Gokush_gi|17402855|ref|NP_510879.1|_hypothetical_protein_PhiCPG1p9_[Guinea_pig_Chlamydia_phage]
Length=263
Score = 20.0 bits (40), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 7/21 (33%), Positives = 10/21 (48%), Gaps = 0/21 (0%)
Query 73 KRMSETPPKNSTTVTQHFDPE 93
K + PP+ + FDPE
Sbjct 196 KSFTTRPPRYYDKLHSRFDPE 216
> Gokush_Human_feces_E_007_Microviridae_AG0413_putative.peptidase.M15A
Length=127
Score = 19.6 bits (39), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 14/26 (54%), Gaps = 1/26 (4%)
Query 82 NSTTVTQHFDPEMQFKGVDKTVTTKW 107
N+ +TQHF E +F+ DK W
Sbjct 10 NNERLTQHFKAE-EFRCKDKEKEFLW 34
> Alpavirinae_Human_feces_B_039_Microviridae_AG094_putative.VP2
Length=380
Score = 19.6 bits (39), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 0/30 (0%)
Query 38 QYWTEIANTIIKLAQVVGNLTIGGKTGKLI 67
YW +A I +A GN + G I
Sbjct 335 HYWESVARGIGSIAAGAGNFIGAFRPGANI 364
> Gokush_gi|77020121|ref|YP_338244.1|_putative_replication_protein_[Chlamydia_phage_4]
Length=315
Score = 19.6 bits (39), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 29/66 (44%), Gaps = 10/66 (15%)
Query 7 YYAAGETQKAEAKMLEVKKRTEEATAELRELQYWTEIANTIIKLAQVVGNLTIGGKTGKL 66
YY ++ +M EVK++ E L E++ ++ Q + N +T +L
Sbjct 257 YYDKLHSRFDPEEMDEVKQKRVEKVMAL------PELSQDKAEVKQYIFN----DRTKRL 306
Query 67 IREYTE 72
R+Y E
Sbjct 307 FRDYEE 312
Lambda K H a alpha
0.310 0.124 0.345 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 5733300