bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-23_CDS_annotation_glimmer3.pl_2_3

Length=97
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Pichovirinae_Pavin_723_Microviridae_AG0325_hypothetical.protein     22.7    0.53
  Gokush_Bourget_309_Microviridae_AG0288_putative.VP1                 21.6    1.8
  Gokush_68_Microbialite_003_Microviridae_AG0160_putative.VP3         20.8    3.4
  Gokush_Human_feces_E_007_Microviridae_AG0412_putative.VP1           19.6    9.2


> Pichovirinae_Pavin_723_Microviridae_AG0325_hypothetical.protein
Length=123

 Score = 22.7 bits (47),  Expect = 0.53, Method: Compositional matrix adjust.
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 3/38 (8%)

Query  48  GEDYDPPLDFDPNSFSRIDKFDGLESGQGVIDDFLERQ  85
           GED+  P   DP +   +DK + LES +  +     RQ
Sbjct  66  GEDFYMP---DPKTLDLVDKAELLESAKQEVASIKSRQ  100


> Gokush_Bourget_309_Microviridae_AG0288_putative.VP1
Length=536

 Score = 21.6 bits (44),  Expect = 1.8, Method: Composition-based stats.
 Identities = 7/16 (44%), Positives = 12/16 (75%), Gaps = 0/16 (0%)

Query  21   SVLNGSGSVEVLPGRP  36
            ++L+ SG+ +V PG P
Sbjct  248  AILSASGTTQVAPGTP  263


> Gokush_68_Microbialite_003_Microviridae_AG0160_putative.VP3
Length=159

 Score = 20.8 bits (42),  Expect = 3.4, Method: Compositional matrix adjust.
 Identities = 15/66 (23%), Positives = 27/66 (41%), Gaps = 6/66 (9%)

Query  16  GERIMSVLNGSGSVEVLPGRPDVQASDSDFRKGEDYDPPLDFDPNSFSRIDKFDGLESGQ  75
           G+ I+   NGS  V      P    +D  F+K  D +  +D     +++      ++  Q
Sbjct  13  GKNIILRKNGSKRVVTHNAMPS--KTDQSFKKDCDVNHIMD----KYTKTGHLTHMQQKQ  66

Query  76  GVIDDF  81
           G+  D 
Sbjct  67  GMYADV  72


> Gokush_Human_feces_E_007_Microviridae_AG0412_putative.VP1
Length=573

 Score = 19.6 bits (39),  Expect = 9.2, Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 3/42 (7%)

Query  3    EYMIEDLPEYRSRGERIMSVLNGSGSVEVLPGRPDVQASDSD  44
            +Y    LP Y  RG  +   L G+  V +  G  D Q + SD
Sbjct  221  DYFSSCLP-YPQRGPEVTIALTGNAPVYI--GSNDTQYTASD  259



Lambda      K        H        a         alpha
   0.311    0.135    0.378    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 4724881