bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-25_CDS_annotation_glimmer3.pl_2_3

Length=54
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_A_047_Microviridae_AG0311_putative.VP1      19.6    3.0
  Alpavirinae_Human_feces_A_048_Microviridae_AG087_putative.VP1       19.2    3.5
  Alpavirinae_Human_feces_B_021_Microviridae_AG0368_putative.VP1      18.9    4.4
  Alpavirinae_Human_feces_C_029_Microviridae_AG0109_putative.VP1      18.9    5.0


> Alpavirinae_Human_feces_A_047_Microviridae_AG0311_putative.VP1
Length=637

 Score = 19.6 bits (39),  Expect = 3.0, Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 8/34 (24%)

Query  11   IEPSFKAYVTEKHIKKTP--------HKNRVRRG  36
            + P F ++  E HI   P        H NR + G
Sbjct  71   VGPLFGSFKLEHHIYTIPFRLYNSWLHNNRTKIG  104


> Alpavirinae_Human_feces_A_048_Microviridae_AG087_putative.VP1
Length=650

 Score = 19.2 bits (38),  Expect = 3.5, Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 8/34 (24%)

Query  11   IEPSFKAYVTEKHIKKTP--------HKNRVRRG  36
            + P F ++  E HI   P        H NR + G
Sbjct  73   VGPLFGSFKHENHIFSVPLRLYNSWLHNNRTKIG  106


> Alpavirinae_Human_feces_B_021_Microviridae_AG0368_putative.VP1
Length=649

 Score = 18.9 bits (37),  Expect = 4.4, Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 8/34 (24%)

Query  11   IEPSFKAYVTEKHIKKTP--------HKNRVRRG  36
            + P F ++  E HI   P        H NR + G
Sbjct  73   VGPLFGSFKHENHIFSVPIRLYNSWLHNNRTKIG  106


> Alpavirinae_Human_feces_C_029_Microviridae_AG0109_putative.VP1
Length=640

 Score = 18.9 bits (37),  Expect = 5.0, Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 8/34 (24%)

Query  11   IEPSFKAYVTEKHIKKTP--------HKNRVRRG  36
            + P F ++  E H+   P        H NR + G
Sbjct  71   VGPLFGSFKLEHHVYTVPFRLYNSWLHNNRTKIG  104



Lambda      K        H        a         alpha
   0.320    0.128    0.374    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3709748