bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-25_CDS_annotation_glimmer3.pl_2_6
Length=76
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_feces_B_068_Microviridae_AG0329_putative.AF306496_... 47.0 3e-10
Gokush_Human_feces_A_019_Microviridae_AG0441_putative.nonstruct... 45.8 1e-09
Gokush_Human_feces_E_017_Microviridae_AG0130_putative.nonstruct... 45.4 1e-09
Gokush_gi|12085143|ref|NP_073545.1|_nonstructural_protein_[Bdel... 42.7 1e-08
Gokush_Human_feces_C_014_Microviridae_AG0149_putative.nonstruct... 40.4 6e-08
Gokush_68_Microbialite_003_Microviridae_AG0161_putative.AF30649... 40.0 1e-07
Gokush_Bourget_052_Microviridae_AG0194_putative.nonstructural.p... 38.1 5e-07
Gokush_Bourget_915_Microviridae_AG0176_putative.nonstructural.p... 34.3 1e-05
Gokush_Bourget_504_Microviridae_AG0260_putative.nonstructural.p... 34.3 1e-05
Gokush_Bourget_224_Microviridae_AG0247_putative.nonstructural.p... 33.9 1e-05
> Gokush_Human_feces_B_068_Microviridae_AG0329_putative.AF306496_8.Vp5
Length=97
Score = 47.0 bits (110), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (56%), Gaps = 8/77 (10%)
Query 1 MVYKIYSVKDAVAGQFSEPRIFMNEGLAVRWFKNLCEKSE-----IASDLSLYYLGEYDL 55
M+Y IY+++D + G F P +N+ A+R F+ +S + SD SLY LG YD
Sbjct 1 MIYNIYAMRDELTG-FLPPTYDINDAAAMRNFRVAILRSSDSIHYMPSDYSLYRLGLYDS 59
Query 56 ESG--VISSAPEFVMNG 70
++G ++ P F+M G
Sbjct 60 DTGRLIVDEVPTFLMRG 76
> Gokush_Human_feces_A_019_Microviridae_AG0441_putative.nonstructural.protein
Length=87
Score = 45.8 bits (107), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/62 (39%), Positives = 37/62 (60%), Gaps = 4/62 (6%)
Query 1 MVYKIYSVKDAVAGQFSEPRIFMNEGLAVRWFKNLCEK----SEIASDLSLYYLGEYDLE 56
M++ IYSV+D VA QF +N+G A+R FK+ C + A D +L+ + ++D E
Sbjct 1 MIHNIYSVRDNVAEQFMGGFESVNDGTAIRAFKDACNDENQLGKNAKDYTLFKVAKFDDE 60
Query 57 SG 58
SG
Sbjct 61 SG 62
> Gokush_Human_feces_E_017_Microviridae_AG0130_putative.nonstructural.protein
Length=87
Score = 45.4 bits (106), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/62 (39%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query 1 MVYKIYSVKDAVAGQFSEPRIFMNEGLAVRWFKNLCEK----SEIASDLSLYYLGEYDLE 56
M++ IYSV+D +A QF +N+G AVR FK+ C + A D +L+ + +D E
Sbjct 1 MIHNIYSVRDNIAEQFMGGFESVNDGTAVRAFKDACNDENQLGKNAKDYTLFKIATFDDE 60
Query 57 SG 58
SG
Sbjct 61 SG 62
> Gokush_gi|12085143|ref|NP_073545.1|_nonstructural_protein_[Bdellovibrio_phage_phiMH2K]
Length=84
Score = 42.7 bits (99), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (54%), Gaps = 7/78 (9%)
Query 1 MVYKIYSVKDAVAGQFSEPRIFMNEGLAVRWFKNLCE--KSEIAS---DLSLYYLGEYDL 55
M K++S++D+ G + P G A R F+ L + +S +A+ D L++LGEYD
Sbjct 1 MQLKVFSIRDSKTGVYGTPFYQHTHGQAERSFQQLAKDPQSTVANHPEDFDLFHLGEYDD 60
Query 56 ESGVIS--SAPEFVMNGV 71
++G ++ PE + +
Sbjct 61 QTGKLTPLDTPEHCVKAI 78
> Gokush_Human_feces_C_014_Microviridae_AG0149_putative.nonstructural.protein
Length=84
Score = 40.4 bits (93), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/61 (38%), Positives = 32/61 (52%), Gaps = 4/61 (7%)
Query 1 MVYKIYSVKDAVAGQFSEPRIFMNEGLAVR---WFKNLCEKSEIASDLSLYYLGEYDLES 57
M K YS D++ +S P + N A+R W N + EI D+SL LGE+D E+
Sbjct 1 MTLKFYSFHDSITNGYSNPFLQQNRAQAIRTAKWKANESKLQEI-EDISLVELGEFDTEA 59
Query 58 G 58
G
Sbjct 60 G 60
> Gokush_68_Microbialite_003_Microviridae_AG0161_putative.AF306496_8.Vp5
Length=90
Score = 40.0 bits (92), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/75 (31%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query 4 KIYSVKDAVAGQFSEPRIFMNEGLAVRWFKNLCEK-----SEIASDLSLYYLGEYDLESG 58
K+YS++D+ F+ P + G A R F+ L ++ D LYYLG+YD G
Sbjct 3 KMYSIRDSKGEVFNTPFFNKSHGEAERNFRTLVNDGKSMVNQYPDDFDLYYLGDYDDNKG 62
Query 59 VIS--SAPEFVMNGV 71
V P+ ++ V
Sbjct 63 VCIPLDTPQHIIKAV 77
> Gokush_Bourget_052_Microviridae_AG0194_putative.nonstructural.protein
Length=85
Score = 38.1 bits (87), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/75 (27%), Positives = 38/75 (51%), Gaps = 7/75 (9%)
Query 1 MVYKIYSVKDAVAGQFSEPRIFMNEGLAVRWFKNLCEKSEIAS-------DLSLYYLGEY 53
M+ I SV+D + ++ P + + +A+R F + +++ + D LY+LGE+
Sbjct 1 MIQFIVSVQDRASQTYARPFVVPHRNIAIRDFTDEVNRADSQNPLNKHPDDYDLYFLGEF 60
Query 54 DLESGVISSAPEFVM 68
D +G I FV+
Sbjct 61 DDATGQIVCGDPFVL 75
> Gokush_Bourget_915_Microviridae_AG0176_putative.nonstructural.protein
Length=85
Score = 34.3 bits (77), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (48%), Gaps = 8/73 (11%)
Query 1 MVYKIYSVKDAVAGQFSEPRIFMNEGLAVRWFKNLCEKS-------EIASDLSLYYLGEY 53
M+ + SVKD A F+ P + +A+R F + ++ + D LY LGE+
Sbjct 1 MILFVVSVKDRAADVFNRPFFVPHRNVAIRDFTDEVNRASGDNQLNKHPDDFDLYLLGEF 60
Query 54 DLESGV-ISSAPE 65
D G +++ P+
Sbjct 61 DDARGAFVNNEPQ 73
> Gokush_Bourget_504_Microviridae_AG0260_putative.nonstructural.protein
Length=87
Score = 34.3 bits (77), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 28/64 (44%), Gaps = 7/64 (11%)
Query 5 IYSVKDAVAGQFSEPRIFMNEGLAVRWFKNLCEKS-------EIASDLSLYYLGEYDLES 57
+ SVKD A F P + G+A+R F + + D LY LGE+D S
Sbjct 5 LCSVKDRAADAFGRPMFVPSVGVAIRSFSDEVNRQSDDNQLHNHPDDFDLYELGEFDDNS 64
Query 58 GVIS 61
G +
Sbjct 65 GTFA 68
> Gokush_Bourget_224_Microviridae_AG0247_putative.nonstructural.protein
Length=85
Score = 33.9 bits (76), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 13/69 (19%)
Query 7 SVKDAVAGQFSEPRIFMNEGLAVRWFKNLCEKSEI-------ASDLSLYYLGEYDLESGV 59
SVKD + F+ P + +A+R F + +S + D LY LGE++ +G
Sbjct 7 SVKDRASNVFNRPFFVPHRNVAIRDFTDEVNRSAVDNQLNKHPDDFDLYLLGEFNDNTG- 65
Query 60 ISSAPEFVM 68
EFVM
Sbjct 66 -----EFVM 69
Lambda K H a alpha
0.318 0.135 0.386 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3629730