bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-29_CDS_annotation_glimmer3.pl_2_1
Length=295
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_feces_A_029_Microviridae_AG0221_putative.VP2 167 9e-51
Gokush_Human_feces_B_068_Microviridae_AG0332_putative.VP2 149 1e-43
Gokush_Human_feces_A_013_Microviridae_AG010_putative.VP2 129 6e-37
Gokush_Human_gut_32_030_Microviridae_AG0186_putative.VP2 122 3e-34
Gokush_Human_gut_31_045_Microviridae_AG0115_putative.VP2 122 3e-34
Gokush_Human_gut_27_035_Microviridae_AG0164_putative.VP2 122 3e-34
Gokush_Human_feces_E_009_Microviridae_AG0283_putative.VP2 114 4e-31
Gokush_gi|393707865|ref|YP_004732987.1|_structural_protein_VP2_... 63.9 7e-14
Gokush_Human_feces_A_019_Microviridae_AG0437_putative.VP2 59.7 5e-12
Gokush_Human_feces_E_017_Microviridae_AG0128_putative.VP2 58.5 1e-11
> Gokush_Human_feces_A_029_Microviridae_AG0221_putative.VP2
Length=299
Score = 167 bits (422), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 134/294 (46%), Positives = 178/294 (61%), Gaps = 27/294 (9%)
Query 6 GALQGIAGQNTSSSAKQAEELR----TWQEQQAELARKYNSQEAQKNRDWQERMSSTAHQ 61
G LQ + S+ ELR W +QA+ A ++N EA+K+R WQE MSSTAHQ
Sbjct 26 GVLQSGERSSMRSAMDYLTELRDYNNAWTAKQADKAMEFNRDEAEKSRKWQEYMSSTAHQ 85
Query 62 REVRDLIAAGLNPVLsvtggsgaavtsgatasssapsgamgsvDNSATGAVAglfgslls 121
REV+DL+AAGLNPVLS GGSGA VTSGATAS APS D S + + LFG+LLS
Sbjct 86 REVKDLVAAGLNPVLSAMGGSGAPVTSGATASGYAPSA-----DTSLSSGLVQLFGALLS 140
Query 122 sflslEGTRVSAQSNQAIADKYTAMSKYTSELQAQTQLTSTNIQAMAQKYTADAHLAGTK 181
S L + AQ+N ++ADKYT S+ ++LQ+QTQLT+ NI AMA +Y AD H
Sbjct 141 SQTQLANKALDAQTNLSVADKYTETSRAVAQLQSQTQLTTANISAMASRYAADVH----- 195
Query 182 YAADQSAAAQKVSASIHAAAQKYGYNVQSMTQRDIAAFNAQVNKDLQKAGFKQEFDIKKA 241
A A KV+ASI AAAQ+YGY+V SMT + IAAFNA VNK L++ +FD+K+A
Sbjct 196 ------ADATKVAASISAAAQRYGYDVMSMTNKQIAAFNADVNKQLKQMDIDAQFDLKEA 249
Query 242 FPNNAWNVFGGLGTQAVEDIQNA-NLPWGKNIFDFFAN--VLPGAISGKDASKR 292
+P++ GLG I ++ + K++++ + V PG D +R
Sbjct 250 YPSSLL----GLGESLFGQIFDSEGVSGAKDVYNGYIRRYVNPGVHFDTDGGRR 299
> Gokush_Human_feces_B_068_Microviridae_AG0332_putative.VP2
Length=346
Score = 149 bits (376), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/233 (54%), Positives = 159/233 (68%), Gaps = 11/233 (5%)
Query 11 IAGQNTSSSAKQAEELRTWQEQQAELARKYNSQEAQKNRDWQERMSSTAHQREVRDLIAA 70
I QN + SA QA + +Q + A+ A +N +EAQKNRDWQ+ MS TAHQRE++DL AA
Sbjct 61 ITAQNNAWSAAQAAQQMAFQRESAQTAMAFNREEAQKNRDWQQYMSDTAHQREIKDLQAA 120
Query 71 GLNPVLsvtggsgaavtsgatasssapsgamgsvDNSATGAVAglfgsllssflslEGTR 130
GLNPVLS GG+GA VTSGATAS A GA G D SA+GA+ L GSL+ S L T
Sbjct 121 GLNPVLSAMGGNGAPVTSGATASGYASQGAKGDTDTSASGALVSLLGSLIQSQTQLANTA 180
Query 131 VSAQSNQAIADKYTAMSKYTSELQAQTQLTSTNIQAMAQKYTADAHLAGTKYAADQSAAA 190
SA ++ A+ADKYT M K+ ELQA TQLT++ I AMA +KYAAD A+A
Sbjct 181 TSANASLAVADKYTQMQKFVGELQANTQLTTSKISAMA-----------SKYAADTGASA 229
Query 191 QKVSASIHAAAQKYGYNVQSMTQRDIAAFNAQVNKDLQKAGFKQEFDIKKAFP 243
+ +A+IHAAAQKYGY+V +MTQ+ IA+FN++VN LQ+ EFD++K FP
Sbjct 230 TQAAAAIHAAAQKYGYDVNAMTQKQIASFNSEVNWYLQQDKQAHEFDMEKYFP 282
> Gokush_Human_feces_A_013_Microviridae_AG010_putative.VP2
Length=276
Score = 129 bits (325), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 123/179 (69%), Gaps = 0/179 (0%)
Query 8 LQGIAGQNTSSSAKQAEELRTWQEQQAELARKYNSQEAQKNRDWQERMSSTAHQREVRDL 67
+QGIA N + SA+QA+ R WQ QQ A ++N++EA KNR WQE MS+TAHQREVRDL
Sbjct 17 MQGIAQANNAWSAQQAQIQREWQVQQNAKAMQFNAEEAAKNRSWQEFMSNTAHQREVRDL 76
Query 68 IAAGLNPVLsvtggsgaavtsgatasssapsgamgsvDNSATGAVAglfgsllssflslE 127
+AAGLNPVLS G+GAAV SGATAS SGA G D S +GA+A L GSL+S+ +LE
Sbjct 77 MAAGLNPVLSAMNGNGAAVGSGATASGVTSSGAKGDTDTSTSGAIANLLGSLVSASQALE 136
Query 128 GTRVSAQSNQAIADKYTAMSKYTSELQAQTQLTSTNIQAMAQKYTADAHLAGTKYAADQ 186
++A++ +A+ADKY AMS+ +E+ L S I A A KY AD A T Y+ADQ
Sbjct 137 SANINARTQEAVADKYNAMSQIVAEINKSATLGSAGIHAGASKYAADRGAAATMYSADQ 195
> Gokush_Human_gut_32_030_Microviridae_AG0186_putative.VP2
Length=289
Score = 122 bits (307), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/251 (40%), Positives = 152/251 (61%), Gaps = 4/251 (2%)
Query 8 LQGIAGQNTSSSAKQAEELRTWQEQQAELARKYNSQEAQKNRDWQERMSSTAHQREVRDL 67
L+G+A N++ +A+QA+ R W E ++NS EA KNR WQE MS+TAHQREVRDL
Sbjct 31 LKGVAQANSAFNAEQAKLQRDWTESMTARQMEFNSAEAAKNRQWQEMMSNTAHQREVRDL 90
Query 68 IAAGLNPVLsvtggsgaavtsgatasssapsgamgsvDNSATGAVAglfgsllssflslE 127
+AAGLNPVLS G+GAAV SGATAS+S SG+ D +A+GA+A L GS+L + +L+
Sbjct 91 MAAGLNPVLSAMNGNGAAVGSGATASASLGSGSKADADTAASGAIANLLGSILGAQTALQ 150
Query 128 GTRVSAQSNQAIADKYTAMSKYTSELQAQTQLTSTNIQAMAQKYTADAHLAGTKYAADQS 187
++A++ +A+ADKYTAM +++ A + I A A + A + T+YAA Q+
Sbjct 151 SANINARTQEAVADKYTAMEHIVAQIAAAAGIKQAGIHAGATRDAAAMSSSATRYAAGQA 210
Query 188 AAAQKVSASIHAAAQKYGYNVQSMTQRDIAAFNAQVNKDLQKAGFKQEFDIKKAFPNNAW 247
A A +S+++AA +Y + Q ++ + A + D K +DIK+ F N
Sbjct 211 ALASMFGSSVNSAATRYSAD-QHLSGTK---YGADKSSDASKYASDTNWDIKRTFGNGDK 266
Query 248 NVFGGLGTQAV 258
+ G+ +++
Sbjct 267 SSLAGMLAESI 277
> Gokush_Human_gut_31_045_Microviridae_AG0115_putative.VP2
Length=289
Score = 122 bits (307), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/251 (40%), Positives = 152/251 (61%), Gaps = 4/251 (2%)
Query 8 LQGIAGQNTSSSAKQAEELRTWQEQQAELARKYNSQEAQKNRDWQERMSSTAHQREVRDL 67
L+G+A N++ +A+QA+ R W E ++NS EA KNR WQE MS+TAHQREVRDL
Sbjct 31 LKGVAQANSAFNAEQAKLQRDWTESMTARQMEFNSAEAAKNRQWQEMMSNTAHQREVRDL 90
Query 68 IAAGLNPVLsvtggsgaavtsgatasssapsgamgsvDNSATGAVAglfgsllssflslE 127
+AAGLNPVLS G+GAAV SGATAS+S SG+ D +A+GA+A L GS+L + +L+
Sbjct 91 MAAGLNPVLSAMNGNGAAVGSGATASASLGSGSKADADTAASGAIANLLGSILGAQTALQ 150
Query 128 GTRVSAQSNQAIADKYTAMSKYTSELQAQTQLTSTNIQAMAQKYTADAHLAGTKYAADQS 187
++A++ +A+ADKYTAM +++ A + I A A + A + T+YAA Q+
Sbjct 151 SANINARTQEAVADKYTAMEHIVAQIAAAAGIKQAGIHAGATRDAAAMSSSATRYAAGQA 210
Query 188 AAAQKVSASIHAAAQKYGYNVQSMTQRDIAAFNAQVNKDLQKAGFKQEFDIKKAFPNNAW 247
A A +S+++AA +Y + Q ++ + A + D K +DIK+ F N
Sbjct 211 ALASMFGSSVNSAATRYSAD-QHLSGTK---YGADKSSDASKYASDTNWDIKRTFGNGDK 266
Query 248 NVFGGLGTQAV 258
+ G+ +++
Sbjct 267 SSLAGMLAESI 277
> Gokush_Human_gut_27_035_Microviridae_AG0164_putative.VP2
Length=289
Score = 122 bits (307), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/251 (40%), Positives = 152/251 (61%), Gaps = 4/251 (2%)
Query 8 LQGIAGQNTSSSAKQAEELRTWQEQQAELARKYNSQEAQKNRDWQERMSSTAHQREVRDL 67
L+G+A N++ +A+QA+ R W E ++NS EA KNR WQE MS+TAHQREVRDL
Sbjct 31 LKGVAQANSAFNAEQAKLQRDWTESMTARQMEFNSAEAAKNRQWQEMMSNTAHQREVRDL 90
Query 68 IAAGLNPVLsvtggsgaavtsgatasssapsgamgsvDNSATGAVAglfgsllssflslE 127
+AAGLNPVLS G+GAAV SGATAS+S SG+ D +A+GA+A L GS+L + +L+
Sbjct 91 MAAGLNPVLSAMNGNGAAVGSGATASASLGSGSKADADTAASGAIANLLGSILGAQTALQ 150
Query 128 GTRVSAQSNQAIADKYTAMSKYTSELQAQTQLTSTNIQAMAQKYTADAHLAGTKYAADQS 187
++A++ +A+ADKYTAM +++ A + I A A + A + T+YAA Q+
Sbjct 151 SANINARTQEAVADKYTAMEHIVAQIAAAAGIKQAGIHAGATRDAAAMSSSATRYAAGQA 210
Query 188 AAAQKVSASIHAAAQKYGYNVQSMTQRDIAAFNAQVNKDLQKAGFKQEFDIKKAFPNNAW 247
A A +S+++AA +Y + Q ++ + A + D K +DIK+ F N
Sbjct 211 ALASMFGSSVNSAATRYSAD-QHLSGTK---YGADKSSDASKYASDTNWDIKRTFGNGDK 266
Query 248 NVFGGLGTQAV 258
+ G+ +++
Sbjct 267 SSLAGMLAESI 277
> Gokush_Human_feces_E_009_Microviridae_AG0283_putative.VP2
Length=294
Score = 114 bits (285), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/195 (49%), Positives = 136/195 (70%), Gaps = 10/195 (5%)
Query 7 ALQGIAGQNTSSSAKQAEELRTWQEQQAELARKYNSQEAQKNRDWQERMSSTAHQREVRD 66
++ GIA N + SA QA++LR+WQE+Q A ++N+ EA KNRDWQE MS+TAHQRE+ D
Sbjct 38 SIAGIAKYNNAYSASQAQDLRSWQEEQNRKAMEFNAAEAAKNRDWQEYMSNTAHQREIAD 97
Query 67 LIAAGLNPVLsvtggsgaavtsgatasssapsgamgsvDNSATGAVAglfgsllssflsl 126
L AAGLNPVLS TGG+GAAVTSGATAS SGA G VD S A+A + G+L ++ +L
Sbjct 98 LKAAGLNPVLSATGGNGAAVTSGATASGVTSSGAKGDVDTSVNAALASILGTLWNNENAL 157
Query 127 EGTRVSAQSNQAIADKYTAMSKYTSELQAQT-------QLTSTNIQAMAQKYTADAHLAG 179
+ V+A++N A+A+KYTAM++ +++ A T LT++ + A A +Y AD + A
Sbjct 158 KIADVNAKNNLAVAEKYTAMNELVAQIGAMTSRYVSDNSLTASRVMAGATQYAADRNYAS 217
Query 180 TKYAADQSAAAQKVS 194
T+ + +A+AQK++
Sbjct 218 TQLS---TASAQKIA 229
> Gokush_gi|393707865|ref|YP_004732987.1|_structural_protein_VP2_[Microviridae_phi-CA82]
Length=234
Score = 63.9 bits (154), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 29/55 (53%), Positives = 42/55 (76%), Gaps = 0/55 (0%)
Query 22 QAEELRTWQEQQAELARKYNSQEAQKNRDWQERMSSTAHQREVRDLIAAGLNPVL 76
QA++ W +Q E + ++N+QEAQKNRDWQE+MS+TA QR+++D AGLNP+
Sbjct 11 QADKQNKWNAEQTEKSNQFNAQEAQKNRDWQEQMSNTALQRKMQDAEKAGLNPIF 65
> Gokush_Human_feces_A_019_Microviridae_AG0437_putative.VP2
Length=300
Score = 59.7 bits (143), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 3/46 (7%)
Query 34 AELARK---YNSQEAQKNRDWQERMSSTAHQREVRDLIAAGLNPVL 76
AEL R+ YNS EA NR+WQE MSSTA+QR V D+ AAG+NP+L
Sbjct 127 AELMREAMAYNSAEAAHNREWQEYMSSTAYQRAVADMRAAGINPIL 172
> Gokush_Human_feces_E_017_Microviridae_AG0128_putative.VP2
Length=300
Score = 58.5 bits (140), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/46 (61%), Positives = 35/46 (76%), Gaps = 3/46 (7%)
Query 34 AELARK---YNSQEAQKNRDWQERMSSTAHQREVRDLIAAGLNPVL 76
A+L R+ YNS EA NR+WQE MSSTA+QR V D+ AAG+NP+L
Sbjct 127 ADLMREAMAYNSAEAALNREWQEHMSSTAYQRAVADMRAAGINPIL 172
Lambda K H a alpha
0.310 0.120 0.334 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 24593407