bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-2_CDS_annotation_glimmer3.pl_2_7

Length=54
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical....  40.0    6e-08
  Alpavirinae_Human_gut_21_005_Microviridae_AG015_hypothetical.pr...  38.5    1e-07
  Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.p...  35.8    1e-06
  Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical....  35.0    3e-06
  Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical....  33.5    9e-06


> Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical.protein
Length=67

 Score = 40.0 bits (92),  Expect = 6e-08, Method: Compositional matrix adjust.
 Identities = 36/42 (86%), Positives = 38/42 (90%), Gaps = 0/42 (0%)

Query  13  LFVHSCTLSLSVAknntnstqkteqtstssVDSTRININSKY  54
           L V SCT+SLSVAKNN NSTQKTEQTSTSSVDST+ININ KY
Sbjct  26  LCVQSCTMSLSVAKNNQNSTQKTEQTSTSSVDSTKININPKY  67


> Alpavirinae_Human_gut_21_005_Microviridae_AG015_hypothetical.protein
Length=52

 Score = 38.5 bits (88),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 0/49 (0%)

Query  1   LIATFVIGVITTLFVHSCTLSLSVAknntnstqkteqtstssVDSTRIN  49
           +IATF+IGVIT L V SCT S+SV   N NS Q ++QT+   VDS  IN
Sbjct  1   MIATFIIGVITALTVQSCTASMSVFWKNQNSKQDSQQTTQQKVDSVTIN  49


> Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.protein
Length=68

 Score = 35.8 bits (81),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 32/41 (78%), Positives = 37/41 (90%), Gaps = 0/41 (0%)

Query  13  LFVHSCTLSLSVAknntnstqkteqtstssVDSTRININSK  53
           L V SCT+SLSVAKNN N++QKTEQTSTSS+DST+ININ K
Sbjct  26  LCVQSCTMSLSVAKNNNNASQKTEQTSTSSIDSTKININPK  66


> Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical.protein.BACEGG.02719
Length=68

 Score = 35.0 bits (79),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 32/41 (78%), Positives = 36/41 (88%), Gaps = 0/41 (0%)

Query  13  LFVHSCTLSLSVAknntnstqkteqtstssVDSTRININSK  53
           L V SCT+SLSVAKNN N++QKTEQT+TSSVDST ININ K
Sbjct  26  LCVQSCTMSLSVAKNNNNASQKTEQTTTSSVDSTHININPK  66


> Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical.protein
Length=65

 Score = 33.5 bits (75),  Expect = 9e-06, Method: Compositional matrix adjust.
 Identities = 33/39 (85%), Positives = 37/39 (95%), Gaps = 0/39 (0%)

Query  13  LFVHSCTLSLSVAknntnstqkteqtstssVDSTRININ  51
           L V SCT+SLSV+KNN+NSTQKTEQTSTSSVDST+ININ
Sbjct  26  LCVQSCTMSLSVSKNNSNSTQKTEQTSTSSVDSTKININ  64



Lambda      K        H        a         alpha
   0.328    0.136    0.373    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3709748