bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-30_CDS_annotation_glimmer3.pl_2_5
Length=77
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_feces_A_013_Microviridae_AG011_putative.VP4 62.0 1e-14
Gokush_Human_gut_32_030_Microviridae_AG0185_putative.VP4 61.2 2e-14
Gokush_Human_gut_31_045_Microviridae_AG0114_putative.VP4 61.2 2e-14
Gokush_Human_gut_27_035_Microviridae_AG0163_putative.VP4 61.2 2e-14
Gokush_Human_feces_E_009_Microviridae_AG0282_putative.VP4 58.9 2e-13
Gokush_Human_feces_B_068_Microviridae_AG0328_putative.VP4 56.2 1e-12
Gokush_Human_feces_A_029_Microviridae_AG0222_putative.VP4 42.7 8e-08
Gokush_Human_feces_D_014_Microviridae_AG030_putative.VP4 41.6 2e-07
Gokush_Human_feces_E_007_Microviridae_AG0414_putative.VP4 35.4 2e-05
Gokush_Human_feces_A_019_Microviridae_AG0436_putative.VP4 33.5 9e-05
> Gokush_Human_feces_A_013_Microviridae_AG011_putative.VP4
Length=330
Score = 62.0 bits (149), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/77 (43%), Positives = 50/77 (65%), Gaps = 0/77 (0%)
Query 1 VSTRQGGVKFRPPRYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDT 60
+ST +GG KFRPPRYF +L E ++P S++L+E +K LA + + KLS+T +L
Sbjct 254 ISTPKGGRKFRPPRYFEKLFEIEDPVRSKELKEIKKRLALDAQKSKLSKTSLELDELLAV 313
Query 61 EEEVKQEAVKTLRRSKL 77
EE+ + +K LRR+ L
Sbjct 314 EEQNFTDKIKPLRRNLL 330
> Gokush_Human_gut_32_030_Microviridae_AG0185_putative.VP4
Length=310
Score = 61.2 bits (147), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/75 (43%), Positives = 47/75 (63%), Gaps = 0/75 (0%)
Query 1 VSTRQGGVKFRPPRYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDT 60
VST +GG KFRPPRY+++L + + PE S +L+ R LA++ KLS T + D
Sbjct 235 VSTPKGGKKFRPPRYYDKLFDIECPEKSAELKSLRAKLAQQAMEAKLSNTSLDSYELRDV 294
Query 61 EEEVKQEAVKTLRRS 75
EEE + +K+LRR+
Sbjct 295 EEEKQSNRLKSLRRN 309
> Gokush_Human_gut_31_045_Microviridae_AG0114_putative.VP4
Length=310
Score = 61.2 bits (147), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/75 (43%), Positives = 47/75 (63%), Gaps = 0/75 (0%)
Query 1 VSTRQGGVKFRPPRYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDT 60
VST +GG KFRPPRY+++L + + PE S +L+ R LA++ KLS T + D
Sbjct 235 VSTPKGGKKFRPPRYYDKLFDIECPEKSAELKSLRAKLAQQAMEAKLSNTSLDSYELRDV 294
Query 61 EEEVKQEAVKTLRRS 75
EEE + +K+LRR+
Sbjct 295 EEEKQSNRLKSLRRN 309
> Gokush_Human_gut_27_035_Microviridae_AG0163_putative.VP4
Length=310
Score = 61.2 bits (147), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/75 (43%), Positives = 47/75 (63%), Gaps = 0/75 (0%)
Query 1 VSTRQGGVKFRPPRYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDT 60
VST +GG KFRPPRY+++L + + PE S +L+ R LA++ KLS T + D
Sbjct 235 VSTPKGGKKFRPPRYYDKLFDIECPEKSAELKSLRAKLAQQAMEAKLSNTSLDSYELRDV 294
Query 61 EEEVKQEAVKTLRRS 75
EEE + +K+LRR+
Sbjct 295 EEEKQSNRLKSLRRN 309
> Gokush_Human_feces_E_009_Microviridae_AG0282_putative.VP4
Length=340
Score = 58.9 bits (141), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/75 (39%), Positives = 47/75 (63%), Gaps = 0/75 (0%)
Query 1 VSTRQGGVKFRPPRYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDT 60
VST QGG + P+YF+R++ +NPE+ E L+E RK A + + +TD Y++ L
Sbjct 265 VSTPQGGKEITIPKYFDRIVAQENPEMIEALKEKRKAAAIAKNEAIMKKTDLGYLDYLKV 324
Query 61 EEEVKQEAVKTLRRS 75
E+ K+ +K+LRR+
Sbjct 325 AEDNKKARIKSLRRN 339
> Gokush_Human_feces_B_068_Microviridae_AG0328_putative.VP4
Length=351
Score = 56.2 bits (134), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/74 (42%), Positives = 43/74 (58%), Gaps = 0/74 (0%)
Query 1 VSTRQGGVKFRPPRYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDT 60
+ST GG FRPP+YF RL + D P+LS ++ + AK + K DK Y +++ T
Sbjct 276 ISTPNGGRSFRPPQYFERLFDVDCPDLSSARKKKKSEAAKSAEKIKKKLMDKSYSDIMIT 335
Query 61 EEEVKQEAVKTLRR 74
EE VK+ K LRR
Sbjct 336 EENVKKNRTKKLRR 349
> Gokush_Human_feces_A_029_Microviridae_AG0222_putative.VP4
Length=343
Score = 42.7 bits (99), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 38/75 (51%), Gaps = 0/75 (0%)
Query 1 VSTRQGGVKFRPPRYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDT 60
VST GG KF PPRY+ +L + P + + + + N A+ + K ++ +
Sbjct 268 VSTGDGGKKFHPPRYYEKLYDELEPIAAHERKVKKANAARHAEQIKQKHSNLDEYDRRAL 327
Query 61 EEEVKQEAVKTLRRS 75
E +K +K+LRR+
Sbjct 328 AERIKAGQIKSLRRT 342
> Gokush_Human_feces_D_014_Microviridae_AG030_putative.VP4
Length=348
Score = 41.6 bits (96), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 2/72 (3%)
Query 5 QGGVKFR-PPRYFNRLLETDNPELSEKLREARKNLAKEISRCKL-SQTDKRYMNMLDTEE 62
+GG + R PP+YF+RL + +NP+ +++ RK +A+ + +L +T + EE
Sbjct 275 KGGAQTRKPPKYFDRLFKLENPDKFAEIQALRKEVAEHQFKYRLVGKTTLPRIEYYKLEE 334
Query 63 EVKQEAVKTLRR 74
+VKQ+ +K L+R
Sbjct 335 QVKQDTIKALQR 346
> Gokush_Human_feces_E_007_Microviridae_AG0414_putative.VP4
Length=298
Score = 35.4 bits (80), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/64 (30%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query 7 GVKFRPPRYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDTEEEVKQ 66
G + + PRY+ + +E +NP+ ++++ R+ A E R +L + D Y +L+T+E V +
Sbjct 232 GKQAQIPRYYEKQMEAENPQRLWRIKQNRQKNAIEQKRLQLEEQD--YKTILETKERVTK 289
Query 67 EAVK 70
+ K
Sbjct 290 KQTK 293
> Gokush_Human_feces_A_019_Microviridae_AG0436_putative.VP4
Length=338
Score = 33.5 bits (75), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 0/50 (0%)
Query 13 PRYFNRLLETDNPELSEKLREARKNLAKEISRCKLSQTDKRYMNMLDTEE 62
PRYF + +E +NPE +++ R+ A + ++ K+ QTD + L +E
Sbjct 276 PRYFEKQMEAENPEKLWEIKRQRQQKAMDSTKNKMEQTDIKLEGYLSAQE 325
Lambda K H a alpha
0.313 0.129 0.346 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3612480