bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-33_CDS_annotation_glimmer3.pl_2_1
Length=96
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_gut_37_015_Microviridae_AG035_putative.AF306496_8.Vp5 88.6 1e-25
Gokush_Human_gut_36_019_Microviridae_AG0281_putative.AF306496_8... 88.6 1e-25
Gokush_Human_gut_35_025_Microviridae_AG0359_putative.AF306496_8... 88.6 1e-25
Gokush_Human_gut_34_012_Microviridae_AG060_putative.AF306496_8.Vp5 88.6 1e-25
Gokush_Human_gut_33_018_Microviridae_AG0173_putative.nonstructu... 57.4 7e-14
Gokush_SectLung2LLL_002_Microviridae_AG0243_putative.nonstructu... 46.2 1e-09
Gokush_Human_feces_B_068_Microviridae_AG0329_putative.AF306496_... 41.2 5e-08
Gokush_Human_feces_A_019_Microviridae_AG0441_putative.nonstruct... 40.0 1e-07
Gokush_Human_feces_E_017_Microviridae_AG0130_putative.nonstruct... 39.7 2e-07
Gokush_Bourget_248_Microviridae_AG0254_putative.nonstructural.p... 39.7 2e-07
> Gokush_Human_gut_37_015_Microviridae_AG035_putative.AF306496_8.Vp5
Length=88
Score = 88.6 bits (218), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 45/87 (52%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query 1 MSKKVLVSVYDKVACLYFPVMTEINLEVAVRNFREGARKNPQIGAFPSDYELHHVGYFDD 60
MSKKVLVSV+DKVA LY P MTEIN + A+RNF+ GA++N QI + P DY L +G DD
Sbjct 1 MSKKVLVSVFDKVAGLYSPAMTEINPDSAIRNFKIGAKQNQQINSCPEDYCLVLLGTVDD 60
Query 61 ETGQVLPVSSNVLETGNHIVIRAEEVF 87
ETG + PV + + I+ +A+++F
Sbjct 61 ETGSINPV--DTADGSPAILFQAKDLF 85
> Gokush_Human_gut_36_019_Microviridae_AG0281_putative.AF306496_8.Vp5
Length=88
Score = 88.6 bits (218), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 45/87 (52%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query 1 MSKKVLVSVYDKVACLYFPVMTEINLEVAVRNFREGARKNPQIGAFPSDYELHHVGYFDD 60
MSKKVLVSV+DKVA LY P MTEIN + A+RNF+ GA++N QI + P DY L +G DD
Sbjct 1 MSKKVLVSVFDKVAGLYSPAMTEINPDSAIRNFKIGAKQNQQINSCPEDYCLVLLGTVDD 60
Query 61 ETGQVLPVSSNVLETGNHIVIRAEEVF 87
ETG + PV + + I+ +A+++F
Sbjct 61 ETGSINPV--DTADGSPAILFQAKDLF 85
> Gokush_Human_gut_35_025_Microviridae_AG0359_putative.AF306496_8.Vp5
Length=88
Score = 88.6 bits (218), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 45/87 (52%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query 1 MSKKVLVSVYDKVACLYFPVMTEINLEVAVRNFREGARKNPQIGAFPSDYELHHVGYFDD 60
MSKKVLVSV+DKVA LY P MTEIN + A+RNF+ GA++N QI + P DY L +G DD
Sbjct 1 MSKKVLVSVFDKVAGLYSPAMTEINPDSAIRNFKIGAKQNQQINSCPEDYCLVLLGTVDD 60
Query 61 ETGQVLPVSSNVLETGNHIVIRAEEVF 87
ETG + PV + + I+ +A+++F
Sbjct 61 ETGSINPV--DTADGSPAILFQAKDLF 85
> Gokush_Human_gut_34_012_Microviridae_AG060_putative.AF306496_8.Vp5
Length=88
Score = 88.6 bits (218), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 45/87 (52%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query 1 MSKKVLVSVYDKVACLYFPVMTEINLEVAVRNFREGARKNPQIGAFPSDYELHHVGYFDD 60
MSKKVLVSV+DKVA LY P MTEIN + A+RNF+ GA++N QI + P DY L +G DD
Sbjct 1 MSKKVLVSVFDKVAGLYSPAMTEINPDSAIRNFKIGAKQNQQINSCPEDYCLVLLGTVDD 60
Query 61 ETGQVLPVSSNVLETGNHIVIRAEEVF 87
ETG + PV + + I+ +A+++F
Sbjct 61 ETGSINPV--DTADGSPAILFQAKDLF 85
> Gokush_Human_gut_33_018_Microviridae_AG0173_putative.nonstructural.protein
Length=68
Score = 57.4 bits (137), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (66%), Gaps = 2/67 (3%)
Query 21 MTEINLEVAVRNFREGARKNPQIGAFPSDYELHHVGYFDDETGQVLPVSSNVLETGNHIV 80
MTE+N + A+RNF+ GA KN QI A P DY L +G +DETG + PV ++ + I+
Sbjct 1 MTEVNPDSAIRNFKVGAIKNQQINACPEDYCLVLLGTVNDETGSLAPVETD--DGSPAIL 58
Query 81 IRAEEVF 87
+A+++F
Sbjct 59 FQAKDLF 65
> Gokush_SectLung2LLL_002_Microviridae_AG0243_putative.nonstructural.protein
Length=104
Score = 46.2 bits (108), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (2%)
Query 3 KKVLVSVYDKVACLYFPVMTEINLEVAVRNFREGAR-KNPQIGAFPSDYELHHVGYFDDE 61
K++L S+YD A YFP N ++A+R F + + +I P DY L +G FDD
Sbjct 2 KQILFSIYDSKAQAYFPPFCLHNPQMAIRQFSDMVNDQETRISKHPEDYTLFQIGEFDDS 61
Query 62 TGQV 65
++
Sbjct 62 NAKI 65
> Gokush_Human_feces_B_068_Microviridae_AG0329_putative.AF306496_8.Vp5
Length=97
Score = 41.2 bits (95), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (59%), Gaps = 1/51 (2%)
Query 17 YFPVMTEINLEVAVRNFREG-ARKNPQIGAFPSDYELHHVGYFDDETGQVL 66
+ P +IN A+RNFR R + I PSDY L+ +G +D +TG+++
Sbjct 15 FLPPTYDINDAAAMRNFRVAILRSSDSIHYMPSDYSLYRLGLYDSDTGRLI 65
> Gokush_Human_feces_A_019_Microviridae_AG0441_putative.nonstructural.protein
Length=87
Score = 40.0 bits (92), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/59 (34%), Positives = 29/59 (49%), Gaps = 0/59 (0%)
Query 6 LVSVYDKVACLYFPVMTEINLEVAVRNFREGARKNPQIGAFPSDYELHHVGYFDDETGQ 64
+ SV D VA + +N A+R F++ Q+G DY L V FDDE+G+
Sbjct 5 IYSVRDNVAEQFMGGFESVNDGTAIRAFKDACNDENQLGKNAKDYTLFKVAKFDDESGE 63
> Gokush_Human_feces_E_017_Microviridae_AG0130_putative.nonstructural.protein
Length=87
Score = 39.7 bits (91), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 0/59 (0%)
Query 6 LVSVYDKVACLYFPVMTEINLEVAVRNFREGARKNPQIGAFPSDYELHHVGYFDDETGQ 64
+ SV D +A + +N AVR F++ Q+G DY L + FDDE+G+
Sbjct 5 IYSVRDNIAEQFMGGFESVNDGTAVRAFKDACNDENQLGKNAKDYTLFKIATFDDESGE 63
> Gokush_Bourget_248_Microviridae_AG0254_putative.nonstructural.protein
Length=87
Score = 39.7 bits (91), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (41%), Positives = 37/64 (58%), Gaps = 3/64 (5%)
Query 3 KKVLVSVYDKVACLYFPVMTEINLEVAVRNFR-EGARKNP--QIGAFPSDYELHHVGYFD 59
K VL SV D+ A Y M ++ VA+R+F E R +P Q+ P D++L+ +G FD
Sbjct 2 KLVLCSVKDRAADAYGRPMFVPSVGVAIRSFSDEVNRADPENQLYNHPDDFDLYELGEFD 61
Query 60 DETG 63
D TG
Sbjct 62 DNTG 65
Lambda K H a alpha
0.318 0.134 0.379 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 4609640