bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-34_CDS_annotation_glimmer3.pl_2_1
Length=111
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_30_040_Microviridae_AG0138_putative.VP2 192 9e-66
Alpavirinae_Human_gut_31_037_Microviridae_AG0298_hypothetical.p... 95.5 9e-28
Alpavirinae_Human_feces_C_029_Microviridae_AG0107_hypothetical.... 94.4 3e-27
Alpavirinae_Human_feces_A_047_Microviridae_AG0314_hypothetical.... 94.0 3e-27
Alpavirinae_Human_feces_B_020_Microviridae_AG0352_hypothetical.... 92.0 1e-26
Alpavirinae_Human_feces_A_048_Microviridae_AG085_hypothetical.p... 87.8 5e-25
Alpavirinae_Human_feces_B_021_Microviridae_AG0369_hypothetical.... 87.0 1e-24
Alpavirinae_Human_feces_B_023_Microviridae_AG0142_hypothetical.... 87.0 1e-24
Alpavirinae_Human_feces_A_016_Microviridae_AG005_hypothetical.p... 82.0 1e-22
Alpavirinae_Human_feces_A_032_Microviridae_AG0215_hypothetical.... 76.3 2e-20
> Alpavirinae_Human_gut_30_040_Microviridae_AG0138_putative.VP2
Length=111
Score = 192 bits (489), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 90/111 (81%), Positives = 102/111 (92%), Gaps = 0/111 (0%)
Query 1 MIKPKFYPKPIKTDYEFQNGERIETKVSRITENNEPITDGAPIIYTSREDGVLPAYNIRT 60
M KP F+P+P KT+YE+Q GE IETKV RITENNEPITDGAPIIYT+REDGVLPAYNIRT
Sbjct 1 MKKPTFFPRPSKTNYEYQQGESIETKVKRITENNEPITDGAPIIYTNREDGVLPAYNIRT 60
Query 61 DRWEVAQAAMDAVNQANLAKSKNYGKIEQQEQNALESKEIGNTPSQQDSVG 111
DRWE+AQAAM+A+NQ NLAKSKNYGKIEQQEQNAL+SKE+G+T SQQ+S G
Sbjct 61 DRWEIAQAAMEAINQTNLAKSKNYGKIEQQEQNALDSKEVGDTSSQQESAG 111
> Alpavirinae_Human_gut_31_037_Microviridae_AG0298_hypothetical.protein
Length=115
Score = 95.5 bits (236), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 48/86 (56%), Positives = 60/86 (70%), Gaps = 3/86 (3%)
Query 1 MIKPKFYPKPIKTDY---EFQNGERIETKVSRITENNEPITDGAPIIYTSREDGVLPAYN 57
M PK Y P+ T+Y + GERIE KV R+ + PI+DGAPIIYT R+DGVLPAY+
Sbjct 1 MKYPKKYTNPVLTEYAEADLIEGERIEDKVRRLMDEKSPISDGAPIIYTERKDGVLPAYD 60
Query 58 IRTDRWEVAQAAMDAVNQANLAKSKN 83
IRTDRWE+AQ AM+ +A AK K+
Sbjct 61 IRTDRWEIAQKAMEENMKAISAKRKH 86
> Alpavirinae_Human_feces_C_029_Microviridae_AG0107_hypothetical.protein
Length=105
Score = 94.4 bits (233), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 66/93 (71%), Gaps = 11/93 (12%)
Query 16 EFQNGERIETKVSRITENNEPITDGAPIIYTSREDGVLPAYNIRTDRWEVAQAAMDAVNQ 75
E Q GE IETKV+RIT+N EPITD APII+T ++DGVLPAYNIRTDR+++A AMD +
Sbjct 17 EIQEGETIETKVARITQNKEPITDSAPIIFTEKKDGVLPAYNIRTDRFDIALEAMDKI-- 74
Query 76 ANLAKSKNYGKIEQQEQNALESKEIGNTPSQQD 108
G+ + +++NA + ++ GN P++ +
Sbjct 75 ---------GRSKAKKENAPKPEDFGNVPNKTE 98
> Alpavirinae_Human_feces_A_047_Microviridae_AG0314_hypothetical.protein
Length=105
Score = 94.0 bits (232), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 66/97 (68%), Gaps = 13/97 (13%)
Query 15 YEFQNGERIETKVSRITENNEPITDGAPIIYTSREDGVLPAYNIRTDRWEVAQAAMDAVN 74
E Q GE IETKV+RIT+N EPITD APII+T ++DGVLPAYNIRTDR+++A AMD +
Sbjct 16 VEIQEGETIETKVARITQNKEPITDSAPIIFTEKKDGVLPAYNIRTDRFDIALEAMDKIG 75
Query 75 QA-----NLAKSKNYGKIEQQEQNALESKEIGNTPSQ 106
++ N+ K +++G + + + G TPS+
Sbjct 76 RSKAKKENVPKPEDFGNVPNKTE--------GGTPSE 104
> Alpavirinae_Human_feces_B_020_Microviridae_AG0352_hypothetical.protein
Length=102
Score = 92.0 bits (227), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 46/71 (65%), Positives = 52/71 (73%), Gaps = 3/71 (4%)
Query 13 TDYEFQNGERIETKVSRITENNEPITDGAPIIYTSREDGVLPAYNIRTDRWEVAQAAMDA 72
T YE GE IE KV+RI N EPITDGAPIIYT R+DGVLP Y+IRTDRW++A AMD
Sbjct 17 TTYE---GETIEAKVNRIVNNGEPITDGAPIIYTERKDGVLPEYDIRTDRWDIAIDAMDK 73
Query 73 VNQANLAKSKN 83
VN AK +N
Sbjct 74 VNMDRFAKREN 84
> Alpavirinae_Human_feces_A_048_Microviridae_AG085_hypothetical.protein
Length=93
Score = 87.8 bits (216), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 42/90 (47%), Positives = 61/90 (68%), Gaps = 10/90 (11%)
Query 20 GERIETKVSRITENNEPITDGAPIIYTSREDGVLPAYNIRTDRWEVAQAAMDAVNQANLA 79
GE++E KV RI NNEPITDGAPII+T +++GVLP YNIRTDRW++A AMD + A A
Sbjct 9 GEQLEEKVRRIVNNNEPITDGAPIIFTEKKNGVLPEYNIRTDRWDIALDAMDKMEMARKA 68
Query 80 KSKNYGKIEQQEQNALESKEIGNTPSQQDS 109
+ ++ ++ ++ GN P++Q+
Sbjct 69 R----------KETEVKPEDFGNVPNKQNG 88
> Alpavirinae_Human_feces_B_021_Microviridae_AG0369_hypothetical.protein
Length=93
Score = 87.0 bits (214), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 66/89 (74%), Gaps = 10/89 (11%)
Query 20 GERIETKVSRITENNEPITDGAPIIYTSREDGVLPAYNIRTDRWEVAQAAMDAVNQANLA 79
GE++E KV RI NNEPITDGAPII+T ++DGVLP YNIRTDRW++ A+DA+N+ +++
Sbjct 9 GEQLEEKVRRIVNNNEPITDGAPIIFTEKKDGVLPEYNIRTDRWDI---ALDAMNKIDMS 65
Query 80 KSKNYGKIEQQEQNALESKEIGNTPSQQD 108
+ + +++ ++ ++ GN P++Q+
Sbjct 66 R-------KARKEIDVKPEDFGNVPNKQN 87
> Alpavirinae_Human_feces_B_023_Microviridae_AG0142_hypothetical.protein
Length=110
Score = 87.0 bits (214), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 46/62 (74%), Gaps = 0/62 (0%)
Query 20 GERIETKVSRITENNEPITDGAPIIYTSREDGVLPAYNIRTDRWEVAQAAMDAVNQANLA 79
GE IE KV RI N EPI DGA IIYT ++DGVLP YNIRTD+WE+AQ AMD Q +A
Sbjct 21 GETIEHKVQRIVLNKEPIEDGAEIIYTEKKDGVLPQYNIRTDKWEIAQNAMDLAQQQRIA 80
Query 80 KS 81
KS
Sbjct 81 KS 82
> Alpavirinae_Human_feces_A_016_Microviridae_AG005_hypothetical.protein
Length=116
Score = 82.0 bits (201), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (72%), Gaps = 0/71 (0%)
Query 16 EFQNGERIETKVSRITENNEPITDGAPIIYTSREDGVLPAYNIRTDRWEVAQAAMDAVNQ 75
+++ GE I TKV RI + NEP+TDGAP+IYT +EDGV P ++IRTD+W++A AMD VN
Sbjct 19 KYEEGENILTKVRRILDENEPLTDGAPLIYTPKEDGVKPEFDIRTDKWQIAINAMDRVNA 78
Query 76 ANLAKSKNYGK 86
L+ G+
Sbjct 79 YKLSDYTKNGR 89
> Alpavirinae_Human_feces_A_032_Microviridae_AG0215_hypothetical.protein
Length=108
Score = 76.3 bits (186), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 35/84 (42%), Positives = 55/84 (65%), Gaps = 3/84 (4%)
Query 1 MIKPKFYPKPIKTDYEFQN--GERIETKVSRITENNEPITDGAPIIYTSREDGVLPAYNI 58
M KP+ K T +E ++ G+ IE + ++ E EPI D +P+I+T +E GV+P Y++
Sbjct 1 MGKPRIITKSF-TQFEVESYEGQSIEDRCKKLVETGEPIKDTSPLIFTPKEKGVMPQYDV 59
Query 59 RTDRWEVAQAAMDAVNQANLAKSK 82
R D+WE+AQ AMD VN+ +AK +
Sbjct 60 RADKWEIAQNAMDKVNKERIAKGQ 83
Lambda K H a alpha
0.308 0.127 0.353 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 6046823