bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-34_CDS_annotation_glimmer3.pl_2_3
Length=90
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_30_040_Microviridae_AG0136_hypothetical.p... 103 2e-31
Alpavirinae_Human_feces_B_023_Microviridae_AG0144_hypothetical.... 28.5 0.003
Alpavirinae_Human_gut_31_037_Microviridae_AG0296_hypothetical.p... 26.9 0.009
Alpavirinae_Human_feces_A_048_Microviridae_AG091_hypothetical.p... 25.8 0.025
Alpavirinae_Human_feces_B_021_Microviridae_AG0367_hypothetical.... 25.8 0.032
Alpavirinae_Human_feces_A_047_Microviridae_AG0313_hypothetical.... 25.0 0.045
Alpavirinae_Human_gut_32_015_Microviridae_AG0212_hypothetical.p... 25.0 0.057
Alpavirinae_Human_gut_24_085_Microviridae_AG0229_hypothetical.p... 24.6 0.062
Gokush_Human_gut_33_003_Microviridae_AG061_putative.VP1 23.1 0.42
Pichovirinae_Bourget_523_Microviridae_AG0336_hypothetical.protein 21.2 1.7
> Alpavirinae_Human_gut_30_040_Microviridae_AG0136_hypothetical.protein
Length=93
Score = 103 bits (257), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 62/80 (78%), Gaps = 0/80 (0%)
Query 1 MDQQEAVKWAYGQDVVKVTCIKQGEDDKFVLTVGQYSVTPIIFDTQEQAETFLETKFKLT 60
MD++E KW+ QD+VKV+CIK GE+DKFV T+G+Y TP +FDTQ++A +LE FKLT
Sbjct 9 MDEKEIKKWSKKQDIVKVSCIKVGEEDKFVYTIGEYVATPHVFDTQQEAINYLEENFKLT 68
Query 61 NFDLAVIGAMCQRLNELNEQ 80
N DL +IG MCQ+L+++ Q
Sbjct 69 NMDLTIIGTMCQKLSQIYSQ 88
> Alpavirinae_Human_feces_B_023_Microviridae_AG0144_hypothetical.protein
Length=87
Score = 28.5 bits (62), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 23/31 (74%), Gaps = 0/31 (0%)
Query 25 EDDKFVLTVGQYSVTPIIFDTQEQAETFLET 55
E++ F++T+G++ T F T+E+A+ +++T
Sbjct 15 ENNDFIVTIGRHLATEKKFKTKEEAQAYIDT 45
> Alpavirinae_Human_gut_31_037_Microviridae_AG0296_hypothetical.protein
Length=79
Score = 26.9 bits (58), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (65%), Gaps = 0/31 (0%)
Query 25 EDDKFVLTVGQYSVTPIIFDTQEQAETFLET 55
E++ F++T+G + TP F + ++AE +E
Sbjct 20 ENNDFIITLGDHLATPEHFKSYDEAENSIEA 50
> Alpavirinae_Human_feces_A_048_Microviridae_AG091_hypothetical.protein
Length=79
Score = 25.8 bits (55), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/70 (26%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query 25 EDDKFVLTVGQYSVTPIIFDTQEQAETFLETKFKLTNFDLAVIGAMCQRLNELN----EQ 80
E D+F++T+G + T F +++ AE ++ D ++ A+ L E + E
Sbjct 15 ESDEFIITIGNHLATEEKFKSRKAAE------MRINKTDWNLVSALFYALKEADKWAEEN 68
Query 81 NKLYSKNEEK 90
+L +N+EK
Sbjct 69 PELVKQNKEK 78
> Alpavirinae_Human_feces_B_021_Microviridae_AG0367_hypothetical.protein
Length=79
Score = 25.8 bits (55), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/69 (28%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query 25 EDDKFVLTVGQYSVTPIIFDTQEQAETFLETKFKLTNFDLAVIGAMCQRLNELN---EQN 81
E D+F++T+G + T F +++ AE ++ D ++ A+ L E + E+N
Sbjct 15 ESDEFIITIGNHLATEEKFKSRKAAE------MRINKTDWNLVSALIYALKEADKWAEKN 68
Query 82 -KLYSKNEE 89
+L +NEE
Sbjct 69 PELIKQNEE 77
> Alpavirinae_Human_feces_A_047_Microviridae_AG0313_hypothetical.protein
Length=75
Score = 25.0 bits (53), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 13/55 (24%), Positives = 29/55 (53%), Gaps = 6/55 (11%)
Query 25 EDDKFVLTVGQYSVTPIIFDTQEQAETFLETKFKLTNFDLAVIGAMCQRLNELNE 79
++++F++T+G + T F +++ AE ++ D ++ AM L E +E
Sbjct 16 DENEFIITIGNHLATEEKFKSRKAAE------MRINKTDWNLVSAMVYALKEADE 64
> Alpavirinae_Human_gut_32_015_Microviridae_AG0212_hypothetical.protein
Length=72
Score = 25.0 bits (53), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/54 (26%), Positives = 30/54 (56%), Gaps = 5/54 (9%)
Query 22 KQGEDDKFVLTVGQYSVTPIIFDTQEQAETFLETK-----FKLTNFDLAVIGAM 70
K E++K+V+ + + F+T+E+AE ++E+K F L + + V+ +
Sbjct 12 KNVEEEKYVICIKDELASKEEFNTREEAEQYIESKPWELIFNLNVYTIQVLKTI 65
> Alpavirinae_Human_gut_24_085_Microviridae_AG0229_hypothetical.protein
Length=72
Score = 24.6 bits (52), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 0/45 (0%)
Query 22 KQGEDDKFVLTVGQYSVTPIIFDTQEQAETFLETKFKLTNFDLAV 66
K E++K+V+ + + F+T+E+AE ++E+K F+L V
Sbjct 12 KNVEEEKYVICIKDELASKEEFNTREEAEQYIESKPWELIFNLNV 56
> Gokush_Human_gut_33_003_Microviridae_AG061_putative.VP1
Length=545
Score = 23.1 bits (48), Expect = 0.42, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 10/59 (17%)
Query 22 KQGEDDKFVLTVGQYSVTPIIFDTQEQAETFLETKFKLTNFDLAVIGAMCQRLNELNEQ 80
+Q DD + G SVTPI + ++F E F VIG C R N +Q
Sbjct 361 QQTNDDTPIGETGAMSVTPI--NESSFTKSFEEHGF--------VIGVCCVRHNHSYQQ 409
> Pichovirinae_Bourget_523_Microviridae_AG0336_hypothetical.protein
Length=91
Score = 21.2 bits (43), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 7/23 (30%), Positives = 13/23 (57%), Gaps = 0/23 (0%)
Query 8 KWAYGQDVVKVTCIKQGEDDKFV 30
++ GQ V T + GE+++F
Sbjct 11 RYTRGQSVATFTPVYYGEEEEFA 33
Lambda K H a alpha
0.315 0.131 0.371 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 4053560