bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-35_CDS_annotation_glimmer3.pl_2_5

Length=74
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Alpavirinae_Human_feces_A_016_Microviridae_AG006_putative.VP2       19.6    5.9
  Microvirus_gi|9625363|ref|NP_039597.1|_major_coat_protein_[Ente...  19.2    8.3


> Alpavirinae_Human_feces_A_016_Microviridae_AG006_putative.VP2
Length=367

 Score = 19.6 bits (39),  Expect = 5.9, Method: Compositional matrix adjust.
 Identities = 12/35 (34%), Positives = 15/35 (43%), Gaps = 2/35 (6%)

Query  39   TPPDKPEEESNPTNLKDNNKNTKQKNPYRKDTTFL  73
            T P  P   SNP  +    K  +Q+N   K  T L
Sbjct  130  TQPSGPT--SNPVGMALQYKQIEQQNEAIKSQTML  162


> Microvirus_gi|9625363|ref|NP_039597.1|_major_coat_protein_[Enterobacteria_phage_alpha3]
Length=431

 Score = 19.2 bits (38),  Expect = 8.3, Method: Composition-based stats.
 Identities = 8/18 (44%), Positives = 13/18 (72%), Gaps = 1/18 (6%)

Query  41   PDKPEE-ESNPTNLKDNN  57
            P  PE  E+NP+NL +++
Sbjct  139  PWMPERTEANPSNLNEDD  156



Lambda      K        H        a         alpha
   0.305    0.124    0.344    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 3664230