bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-3_CDS_annotation_glimmer3.pl_2_3
Length=68
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.p... 53.1 1e-12
Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical.... 50.4 1e-11
Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical.... 47.8 1e-10
Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical.... 45.1 1e-09
Alpavirinae_Human_gut_21_005_Microviridae_AG015_hypothetical.pr... 38.5 3e-07
Alpavirinae_Human_gut_31_037_Microviridae_AG0295_hypothetical.p... 33.1 2e-05
Alpavirinae_Human_feces_D_015_Microviridae_AG019_putative.VP1 18.9 8.1
> Alpavirinae_Human_feces_A_048_Microviridae_AG089_hypothetical.protein
Length=68
Score = 53.1 bits (126), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/68 (74%), Positives = 61/68 (90%), Gaps = 0/68 (0%)
Query 1 MRITPQQWIEIVKLISTFIIGVITTLFVQSCTISMSVSknnqnstqkteqtstssIDSTK 60
M+IT QW+EI++ IST II +ITTL VQSCT+S+SV+KNN N++QKTEQTSTSSIDSTK
Sbjct 1 MKITGNQWVEIIRAISTAIIAIITTLCVQSCTMSLSVAKNNNNASQKTEQTSTSSIDSTK 60
Query 61 ININPKNF 68
ININPKN+
Sbjct 61 ININPKNY 68
> Alpavirinae_Human_feces_B_021_Microviridae_AG0371_hypothetical.protein.BACEGG.02719
Length=68
Score = 50.4 bits (119), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 60/68 (88%), Gaps = 0/68 (0%)
Query 1 MRITPQQWIEIVKLISTFIIGVITTLFVQSCTISMSVSknnqnstqkteqtstssIDSTK 60
M+IT QW+EI++ IST II +ITTL VQSCT+S+SV+KNN N++QKTEQT+TSS+DST
Sbjct 1 MKITGTQWVEIIRAISTAIIAIITTLCVQSCTMSLSVAKNNNNASQKTEQTTTSSVDSTH 60
Query 61 ININPKNF 68
ININPKN+
Sbjct 61 ININPKNY 68
> Alpavirinae_Human_feces_A_047_Microviridae_AG0316_hypothetical.protein
Length=67
Score = 47.8 bits (112), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 60/66 (91%), Gaps = 0/66 (0%)
Query 1 MRITPQQWIEIVKLISTFIIGVITTLFVQSCTISMSVSknnqnstqkteqtstssIDSTK 60
M+IT QW+EI++ IST II +ITTL VQSCT+S+SV+KNNQNSTQKTEQTSTSS+DSTK
Sbjct 1 MKITGTQWVEIIRAISTAIIAIITTLCVQSCTMSLSVAKNNQNSTQKTEQTSTSSVDSTK 60
Query 61 ININPK 66
ININPK
Sbjct 61 ININPK 66
> Alpavirinae_Human_feces_B_020_Microviridae_AG0350_hypothetical.protein
Length=65
Score = 45.1 bits (105), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/64 (77%), Positives = 57/64 (89%), Gaps = 0/64 (0%)
Query 1 MRITPQQWIEIVKLISTFIIGVITTLFVQSCTISMSVSknnqnstqkteqtstssIDSTK 60
M+IT QW+EI++ IST II +ITTL VQSCT+S+SVSKNN NSTQKTEQTSTSS+DSTK
Sbjct 1 MKITSNQWVEIIRAISTAIIAIITTLCVQSCTMSLSVSKNNSNSTQKTEQTSTSSVDSTK 60
Query 61 ININ 64
ININ
Sbjct 61 ININ 64
> Alpavirinae_Human_gut_21_005_Microviridae_AG015_hypothetical.protein
Length=52
Score = 38.5 bits (88), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/24 (79%), Positives = 21/24 (88%), Gaps = 0/24 (0%)
Query 14 LISTFIIGVITTLFVQSCTISMSV 37
+I+TFIIGVIT L VQSCT SMSV
Sbjct 1 MIATFIIGVITALTVQSCTASMSV 24
> Alpavirinae_Human_gut_31_037_Microviridae_AG0295_hypothetical.protein
Length=64
Score = 33.1 bits (74), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/55 (51%), Positives = 38/55 (69%), Gaps = 0/55 (0%)
Query 8 WIEIVKLISTFIIGVITTLFVQSCTISMSVSknnqnstqkteqtstssIDSTKIN 62
W EI+++I T + ++T L QSCT +MSV N NS QK+EQ++TS IDS KI
Sbjct 6 WKEIIRIIVTVLTALLTALGAQSCTATMSVFWKNANSQQKSEQSTTSKIDSIKIE 60
> Alpavirinae_Human_feces_D_015_Microviridae_AG019_putative.VP1
Length=584
Score = 18.9 bits (37), Expect = 8.1, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 0/25 (0%)
Query 3 ITPQQWIEIVKLISTFIIGVITTLF 27
ITP+ W ++K + T G+ F
Sbjct 515 ITPELWSNMLKPLGTKGTGINYNFF 539
Lambda K H a alpha
0.326 0.136 0.391 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3625464