bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-40_CDS_annotation_glimmer3.pl_2_1
Length=254
Score E
Sequences producing significant alignments: (Bits) Value
Gokush_Human_gut_32_030_Microviridae_AG0188_putative.VP1 434 4e-152
Gokush_Human_gut_31_045_Microviridae_AG0117_putative.VP1 434 4e-152
Gokush_Human_gut_27_035_Microviridae_AG0167_putative.VP1 434 4e-152
Gokush_Human_feces_E_009_Microviridae_AG0285_putative.VP1 434 4e-152
Gokush_Human_feces_A_029_Microviridae_AG0226_putative.VP1 427 3e-150
Gokush_Human_feces_B_068_Microviridae_AG0331_putative.VP1 417 1e-145
Gokush_Human_feces_A_013_Microviridae_AG009_putative.VP1 403 2e-139
Gokush_Human_feces_D_014_Microviridae_AG029_putative.VP1 333 3e-112
Gokush_Human_feces_B_029_Microviridae_AG0417_putative.VP1 315 7e-106
Gokush_Human_feces_D_045_Microviridae_AG0402_putative.VP1 294 1e-97
> Gokush_Human_gut_32_030_Microviridae_AG0188_putative.VP1
Length=562
Score = 434 bits (1117), Expect = 4e-152, Method: Compositional matrix adjust.
Identities = 203/254 (80%), Positives = 223/254 (88%), Gaps = 8/254 (3%)
Query 1 MAFQIQKLYEKDARGGSRYIEILKSHFGVTSPDARLQRPEYLGGNRVPININQVVQQSAT 60
+AFQIQK YE+ ARGGSRY E+++S FGVTSPDARLQRPEYLGGNRVPIN+NQ+VQQS T
Sbjct 317 LAFQIQKFYERQARGGSRYTEVVRSFFGVTSPDARLQRPEYLGGNRVPINVNQIVQQSGT 376
Query 61 ASGETAQGTVTGMSVTTDTHSDFTKSFTEHGFVIGVMVARYDHTYQQGLERFWSRKDRFD 120
SG T QGTV G S+TTD HSDFTKSFTEHG +IGVMVARYDHTYQQGL R WSRKD+FD
Sbjct 377 QSGTTPQGTVVGQSLTTDKHSDFTKSFTEHGLIIGVMVARYDHTYQQGLNRLWSRKDKFD 436
Query 121 YYWPVFANIGEQAVKNKEIFAQGPGVKDTAGAVIDDQVFGYQEAWADYRYKPSRVTGEMR 180
+YWPVFANIGEQA+KNKEIFAQG D D++VFGYQEAWA+YRYKP+ VTGEMR
Sbjct 437 FYWPVFANIGEQAIKNKEIFAQG---NDK-----DNEVFGYQEAWAEYRYKPNMVTGEMR 488
Query 181 SQYAQSLDVWHLADDYSALPMLSDSWIREDKANVDRVLAVTSSVSNQLFADIYIKNRTTR 240
S YAQSLDVWHLADDYS LP LSDSWIREDKAN+DRVLAVTS+VSNQ FADIY+KN TR
Sbjct 489 SAYAQSLDVWHLADDYSTLPSLSDSWIREDKANIDRVLAVTSAVSNQFFADIYVKNYCTR 548
Query 241 PMPMYSIPGLIDHH 254
PMPMYS+PGLIDHH
Sbjct 549 PMPMYSVPGLIDHH 562
> Gokush_Human_gut_31_045_Microviridae_AG0117_putative.VP1
Length=562
Score = 434 bits (1117), Expect = 4e-152, Method: Compositional matrix adjust.
Identities = 203/254 (80%), Positives = 223/254 (88%), Gaps = 8/254 (3%)
Query 1 MAFQIQKLYEKDARGGSRYIEILKSHFGVTSPDARLQRPEYLGGNRVPININQVVQQSAT 60
+AFQIQK YE+ ARGGSRY E+++S FGVTSPDARLQRPEYLGGNRVPIN+NQ+VQQS T
Sbjct 317 LAFQIQKFYERQARGGSRYTEVVRSFFGVTSPDARLQRPEYLGGNRVPINVNQIVQQSGT 376
Query 61 ASGETAQGTVTGMSVTTDTHSDFTKSFTEHGFVIGVMVARYDHTYQQGLERFWSRKDRFD 120
SG T QGTV G S+TTD HSDFTKSFTEHG +IGVMVARYDHTYQQGL R WSRKD+FD
Sbjct 377 QSGTTPQGTVVGQSLTTDKHSDFTKSFTEHGLIIGVMVARYDHTYQQGLNRLWSRKDKFD 436
Query 121 YYWPVFANIGEQAVKNKEIFAQGPGVKDTAGAVIDDQVFGYQEAWADYRYKPSRVTGEMR 180
+YWPVFANIGEQA+KNKEIFAQG D D++VFGYQEAWA+YRYKP+ VTGEMR
Sbjct 437 FYWPVFANIGEQAIKNKEIFAQG---NDK-----DNEVFGYQEAWAEYRYKPNMVTGEMR 488
Query 181 SQYAQSLDVWHLADDYSALPMLSDSWIREDKANVDRVLAVTSSVSNQLFADIYIKNRTTR 240
S YAQSLDVWHLADDYS LP LSDSWIREDKAN+DRVLAVTS+VSNQ FADIY+KN TR
Sbjct 489 SAYAQSLDVWHLADDYSTLPSLSDSWIREDKANIDRVLAVTSAVSNQFFADIYVKNYCTR 548
Query 241 PMPMYSIPGLIDHH 254
PMPMYS+PGLIDHH
Sbjct 549 PMPMYSVPGLIDHH 562
> Gokush_Human_gut_27_035_Microviridae_AG0167_putative.VP1
Length=562
Score = 434 bits (1117), Expect = 4e-152, Method: Compositional matrix adjust.
Identities = 203/254 (80%), Positives = 223/254 (88%), Gaps = 8/254 (3%)
Query 1 MAFQIQKLYEKDARGGSRYIEILKSHFGVTSPDARLQRPEYLGGNRVPININQVVQQSAT 60
+AFQIQK YE+ ARGGSRY E+++S FGVTSPDARLQRPEYLGGNRVPIN+NQ+VQQS T
Sbjct 317 LAFQIQKFYERQARGGSRYTEVVRSFFGVTSPDARLQRPEYLGGNRVPINVNQIVQQSGT 376
Query 61 ASGETAQGTVTGMSVTTDTHSDFTKSFTEHGFVIGVMVARYDHTYQQGLERFWSRKDRFD 120
SG T QGTV G S+TTD HSDFTKSFTEHG +IGVMVARYDHTYQQGL R WSRKD+FD
Sbjct 377 QSGTTPQGTVVGQSLTTDKHSDFTKSFTEHGLIIGVMVARYDHTYQQGLNRLWSRKDKFD 436
Query 121 YYWPVFANIGEQAVKNKEIFAQGPGVKDTAGAVIDDQVFGYQEAWADYRYKPSRVTGEMR 180
+YWPVFANIGEQA+KNKEIFAQG D D++VFGYQEAWA+YRYKP+ VTGEMR
Sbjct 437 FYWPVFANIGEQAIKNKEIFAQG---NDK-----DNEVFGYQEAWAEYRYKPNMVTGEMR 488
Query 181 SQYAQSLDVWHLADDYSALPMLSDSWIREDKANVDRVLAVTSSVSNQLFADIYIKNRTTR 240
S YAQSLDVWHLADDYS LP LSDSWIREDKAN+DRVLAVTS+VSNQ FADIY+KN TR
Sbjct 489 SAYAQSLDVWHLADDYSTLPSLSDSWIREDKANIDRVLAVTSAVSNQFFADIYVKNYCTR 548
Query 241 PMPMYSIPGLIDHH 254
PMPMYS+PGLIDHH
Sbjct 549 PMPMYSVPGLIDHH 562
> Gokush_Human_feces_E_009_Microviridae_AG0285_putative.VP1
Length=559
Score = 434 bits (1117), Expect = 4e-152, Method: Compositional matrix adjust.
Identities = 204/254 (80%), Positives = 220/254 (87%), Gaps = 8/254 (3%)
Query 1 MAFQIQKLYEKDARGGSRYIEILKSHFGVTSPDARLQRPEYLGGNRVPININQVVQQSAT 60
+AFQIQKLYEKDARGG+RY EILK+HFGVTSPD+RLQRPEYLGGNRVPININQVVQ SAT
Sbjct 314 LAFQIQKLYEKDARGGTRYTEILKTHFGVTSPDSRLQRPEYLGGNRVPININQVVQNSAT 373
Query 61 ASGETAQGTVTGMSVTTDTHSDFTKSFTEHGFVIGVMVARYDHTYQQGLERFWSRKDRFD 120
GET G V G SVT+DTHSDF +SFTEHGFVIGVMVARYDHTYQQG+ERFWSRK RFD
Sbjct 374 VEGETPLGNVAGYSVTSDTHSDFRQSFTEHGFVIGVMVARYDHTYQQGIERFWSRKTRFD 433
Query 121 YYWPVFANIGEQAVKNKEIFAQGPGVKDTAGAVIDDQVFGYQEAWADYRYKPSRVTGEMR 180
YYWPV ANIGEQAV NKEI+AQ G DD+VFGYQEAW DYRYKP+RVTGEMR
Sbjct 434 YYWPVLANIGEQAVLNKEIYAQ--------GTAEDDEVFGYQEAWGDYRYKPNRVTGEMR 485
Query 181 SQYAQSLDVWHLADDYSALPMLSDSWIREDKANVDRVLAVTSSVSNQLFADIYIKNRTTR 240
SQYAQSLDVWHL DDY+ LP LS WI EDK NVDRVLAVTS+ +NQLFAD+YI N+TTR
Sbjct 486 SQYAQSLDVWHLGDDYTKLPSLSSEWIVEDKTNVDRVLAVTSTNANQLFADLYINNQTTR 545
Query 241 PMPMYSIPGLIDHH 254
PMPMYSIPGL+DHH
Sbjct 546 PMPMYSIPGLVDHH 559
> Gokush_Human_feces_A_029_Microviridae_AG0226_putative.VP1
Length=470
Score = 427 bits (1097), Expect = 3e-150, Method: Compositional matrix adjust.
Identities = 200/254 (79%), Positives = 219/254 (86%), Gaps = 8/254 (3%)
Query 1 MAFQIQKLYEKDARGGSRYIEILKSHFGVTSPDARLQRPEYLGGNRVPININQVVQQSAT 60
+AFQIQKLYE+DARGG+RYIEILKSHFGVTSPDARLQRPEYLGGNR+PI INQVVQ S T
Sbjct 225 LAFQIQKLYERDARGGTRYIEILKSHFGVTSPDARLQRPEYLGGNRIPITINQVVQNSGT 284
Query 61 ASGETAQGTVTGMSVTTDTHSDFTKSFTEHGFVIGVMVARYDHTYQQGLERFWSRKDRFD 120
SGET QGT T S+TTD H +FTKSF EHGF+IGVMVARYDHTYQQGLERFWSRKDRFD
Sbjct 285 MSGETPQGTTTAYSLTTDVHQEFTKSFVEHGFIIGVMVARYDHTYQQGLERFWSRKDRFD 344
Query 121 YYWPVFANIGEQAVKNKEIFAQGPGVKDTAGAVIDDQVFGYQEAWADYRYKPSRVTGEMR 180
+YWPVFANIGEQA+ NKEI+A G KD+ D +VFGYQEAWADYRYKPSRV+GEMR
Sbjct 345 FYWPVFANIGEQAILNKEIYATG---KDS-----DSEVFGYQEAWADYRYKPSRVSGEMR 396
Query 181 SQYAQSLDVWHLADDYSALPMLSDSWIREDKANVDRVLAVTSSVSNQLFADIYIKNRTTR 240
S LD WHLADDY LP LSDSWIRE+ NV+RVLAVTS VSNQLF D+Y++NRTTR
Sbjct 397 SNAKTPLDSWHLADDYDVLPTLSDSWIREESNNVNRVLAVTSEVSNQLFCDLYVQNRTTR 456
Query 241 PMPMYSIPGLIDHH 254
PMP+YSIPGLIDHH
Sbjct 457 PMPVYSIPGLIDHH 470
> Gokush_Human_feces_B_068_Microviridae_AG0331_putative.VP1
Length=547
Score = 417 bits (1073), Expect = 1e-145, Method: Compositional matrix adjust.
Identities = 195/254 (77%), Positives = 217/254 (85%), Gaps = 8/254 (3%)
Query 1 MAFQIQKLYEKDARGGSRYIEILKSHFGVTSPDARLQRPEYLGGNRVPININQVVQQSAT 60
+AFQIQKLYE+DARGG+RYIEILKSHFGVTSPDARLQRPEYLGGNR+PININQVVQ S+T
Sbjct 302 LAFQIQKLYERDARGGTRYIEILKSHFGVTSPDARLQRPEYLGGNRIPININQVVQSSST 361
Query 61 ASGETAQGTVTGMSVTTDTHSDFTKSFTEHGFVIGVMVARYDHTYQQGLERFWSRKDRFD 120
+ T QG S+T+D HSDFTKSF EHGF+IGVMVARY HTYQQGLERFWSRKDRFD
Sbjct 362 DASGTPQGNTAAYSLTSDNHSDFTKSFVEHGFLIGVMVARYRHTYQQGLERFWSRKDRFD 421
Query 121 YYWPVFANIGEQAVKNKEIFAQGPGVKDTAGAVIDDQVFGYQEAWADYRYKPSRVTGEMR 180
YY+PVFANIGEQA+KNKEI+AQ G V DD+VFGYQEAWADYRY+P+RVTGEMR
Sbjct 422 YYFPVFANIGEQAIKNKEIYAQ--------GTVKDDEVFGYQEAWADYRYRPNRVTGEMR 473
Query 181 SQYAQSLDVWHLADDYSALPMLSDSWIREDKANVDRVLAVTSSVSNQLFADIYIKNRTTR 240
S QSLDVWHL DDY +LP LSDSWIRED V+RVLAV+ +VS QLF DIY++N TR
Sbjct 474 SSAPQSLDVWHLGDDYESLPSLSDSWIREDSKTVNRVLAVSDNVSAQLFCDIYVRNLCTR 533
Query 241 PMPMYSIPGLIDHH 254
PMP+YSIPGLIDHH
Sbjct 534 PMPLYSIPGLIDHH 547
> Gokush_Human_feces_A_013_Microviridae_AG009_putative.VP1
Length=587
Score = 403 bits (1035), Expect = 2e-139, Method: Compositional matrix adjust.
Identities = 190/256 (74%), Positives = 219/256 (86%), Gaps = 10/256 (4%)
Query 1 MAFQIQKLYEKDARGGSRYIEILKSHFGVTSPDARLQRPEYLGGNRVPININQVVQQSAT 60
+AFQIQK YE+ ARGGSRY E+++S FGVTSPDARLQRPEYLGGNRVPININQV+QQS T
Sbjct 340 LAFQIQKFYERQARGGSRYTEVIRSFFGVTSPDARLQRPEYLGGNRVPININQVIQQSGT 399
Query 61 ASGETA--QGTVTGMSVTTDTHSDFTKSFTEHGFVIGVMVARYDHTYQQGLERFWSRKDR 118
S ++ QGTV GMS TTDT+SDFTKSFTEHGF+IGVMVARYDHTYQQGL+R WSRKD+
Sbjct 400 GSESSSTPQGTVVGMSQTTDTNSDFTKSFTEHGFIIGVMVARYDHTYQQGLDRLWSRKDK 459
Query 119 FDYYWPVFANIGEQAVKNKEIFAQGPGVKDTAGAVIDDQVFGYQEAWADYRYKPSRVTGE 178
FD+YWPVFANIGEQA+KNKE++AQG DD+VFGYQEAWA+YRYKP+RVTGE
Sbjct 460 FDFYWPVFANIGEQAIKNKELYAQG--------TAEDDEVFGYQEAWAEYRYKPNRVTGE 511
Query 179 MRSQYAQSLDVWHLADDYSALPMLSDSWIREDKANVDRVLAVTSSVSNQLFADIYIKNRT 238
MRS YA+SLD+WHLADDYS LP LS WI+ED + V+RVLA + +++ Q FADIY+KN
Sbjct 512 MRSSYAKSLDIWHLADDYSKLPSLSAEWIQEDSSTVNRVLAASDNLAAQFFADIYVKNLC 571
Query 239 TRPMPMYSIPGLIDHH 254
TRPMPMYSIPGLIDHH
Sbjct 572 TRPMPMYSIPGLIDHH 587
> Gokush_Human_feces_D_014_Microviridae_AG029_putative.VP1
Length=578
Score = 333 bits (853), Expect = 3e-112, Method: Compositional matrix adjust.
Identities = 156/255 (61%), Positives = 187/255 (73%), Gaps = 8/255 (3%)
Query 1 MAFQIQKLYEKDARGGSRYIEILKSHFGVTSPDARLQRPEYLGGNRVPININQVVQQSAT 60
+AFQ+QKLYE+DARGG+RYIEI+KSHFGVTSPDARLQRPEYLGG R+PINI+QV+Q S T
Sbjct 331 LAFQLQKLYERDARGGTRYIEIIKSHFGVTSPDARLQRPEYLGGERIPINIDQVIQTSGT 390
Query 61 ASGETAQGTVTGMSVTTDTHSDFTKSFTEHGFVIGVMVARYDHTYQQGLERFWSRKDRFD 120
A G T QG S+T S F SF EHG+V+G+ R +HTYQQGLE+ W+RK+RFD
Sbjct 391 AEGTTPQGNTGAYSLTGSQGSYFKHSFVEHGYVLGLACVRTEHTYQQGLEKIWNRKNRFD 450
Query 121 YYWPVFANIGEQAVKNKEIFAQGPGVKDTAGAVIDDQVFGYQEAWADYRYKPSRVTGEMR 180
+YWP ANIGEQA+ NKEI+ Q A +++ FGYQEAWA+YRYKPSRV+ R
Sbjct 451 FYWPALANIGEQAILNKEIYLQ-------ASKATNEEAFGYQEAWAEYRYKPSRVSSAFR 503
Query 181 SQYAQ-SLDVWHLADDYSALPMLSDSWIREDKANVDRVLAVTSSVSNQLFADIYIKNRTT 239
S SLD WH AD Y LP LS WI+E NVDR LAV S++ +Q AD + K + T
Sbjct 504 SNIETGSLDAWHYADYYEELPKLSAEWIQETYKNVDRTLAVQSTLEDQYIADFWFKCKCT 563
Query 240 RPMPMYSIPGLIDHH 254
RPMP+YSIPGLIDHH
Sbjct 564 RPMPIYSIPGLIDHH 578
> Gokush_Human_feces_B_029_Microviridae_AG0417_putative.VP1
Length=530
Score = 315 bits (807), Expect = 7e-106, Method: Compositional matrix adjust.
Identities = 152/253 (60%), Positives = 182/253 (72%), Gaps = 11/253 (4%)
Query 2 AFQIQKLYEKDARGGSRYIEILKSHFGVTSPDARLQRPEYLGGNRVPININQVVQQSATA 61
AFQIQKL EKDARGG+RY E+L+ HFGV SPD+R+Q PEYLGG R+PIN++QV+Q S+T
Sbjct 289 AFQIQKLLEKDARGGTRYREVLREHFGVISPDSRMQIPEYLGGYRLPINVSQVIQTSSTD 348
Query 62 SGETAQGTVTGMSVTTDTHSDFTKSFTEHGFVIGVMVARYDHTYQQGLERFWSRKDRFDY 121
S + G +SVTT FTKSFTEHGF++G+ V R D TYQQG+ER WSRK R+DY
Sbjct 349 S-TSPLGNTAALSVTTMNKPMFTKSFTEHGFIMGLAVVRTDQTYQQGIERMWSRKGRYDY 407
Query 122 YWPVFANIGEQAVKNKEIFAQGPGVKDTAGAVIDDQVFGYQEAWADYRYKPSRVTGEMRS 181
YWPV ANIGEQA+ NKEI+AQ G+ D++ FGYQEAWADYRYKPS+VT RS
Sbjct 408 YWPVLANIGEQAILNKEIYAQ--------GSAKDEEAFGYQEAWADYRYKPSKVTALFRS 459
Query 182 QYAQSLDVWHLADDYSALPMLSDSWIREDKANVDRVLAVTSSVSNQLFADIYIKNRTTRP 241
QSLD WH A DY+ LP LS +W+ + A + R LA S AD Y N+TTR
Sbjct 460 NAQQSLDAWHYAQDYNELPTLSTAWMEQSNAEMKRTLA--RSDQPDFIADFYFMNKTTRC 517
Query 242 MPMYSIPGLIDHH 254
MP+YSIPGLIDHH
Sbjct 518 MPVYSIPGLIDHH 530
> Gokush_Human_feces_D_045_Microviridae_AG0402_putative.VP1
Length=541
Score = 294 bits (753), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 144/253 (57%), Positives = 176/253 (70%), Gaps = 8/253 (3%)
Query 1 MAFQIQKLYEKDARGGSRYIEILKSHFGVTSPDARLQRPEYLGGNRVPININQVVQQSAT 60
+AF Q+ E AR GSRY E+L FGV SPDARLQRPEYLGGNRVPIN+++V +
Sbjct 296 LAFAYQRFLESLARSGSRYTELLLGLFGVRSPDARLQRPEYLGGNRVPINVSEVTNSAQ- 354
Query 61 ASGETAQGTVTGMSVTTDTHSDFTKSFTEHGFVIGVMVARYDHTYQQGLERFWSRKDRFD 120
S + G + S T+D + DF KSFTEHG++ G+MV RYDH+Y QGL RFW+R D
Sbjct 355 -SEQDFLGDLGAKSSTSDVNHDFVKSFTEHGYLFGLMVIRYDHSYSQGLARFWTRNTFTD 413
Query 121 YYWPVFANIGEQAVKNKEIFAQGPGVKDTAGAVIDDQVFGYQEAWADYRYKPSRVTGEMR 180
+Y P FA++GE + EIFA + D +VFGYQE WADYRY+P+ VTGEMR
Sbjct 414 FYNPKFAHLGEVPIYKAEIFASPETIADKT------KVFGYQEIWADYRYRPNMVTGEMR 467
Query 181 SQYAQSLDVWHLADDYSALPMLSDSWIREDKANVDRVLAVTSSVSNQLFADIYIKNRTTR 240
SL W+LAD Y++ P LSD WIRED +NVDR LAVTS VSNQ +ADIYI+N+ TR
Sbjct 468 PGVQNSLAYWNLADHYTSEPTLSDEWIREDVSNVDRALAVTSDVSNQFWADIYIRNKCTR 527
Query 241 PMPMYSIPGLIDH 253
MPMYS+PGLIDH
Sbjct 528 CMPMYSVPGLIDH 540
Lambda K H a alpha
0.318 0.133 0.401 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 20367292