bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: Microviridae_proteins.fasta 575 sequences; 147,441 total letters Query= Contig-43_CDS_annotation_glimmer3.pl_2_1 Length=306 Score E Sequences producing significant alignments: (Bits) Value Gokush_Human_gut_33_003_Microviridae_AG061_putative.VP1 500 3e-177 Gokush_Human_feces_E_007_Microviridae_AG0412_putative.VP1 468 5e-164 Gokush_Human_feces_E_017_Microviridae_AG0127_putative.VP1 360 2e-122 Gokush_Human_feces_A_020_Microviridae_AG0265_putative.VP1 358 2e-121 Gokush_Human_feces_A_019_Microviridae_AG0438_putative.VP1 355 2e-120 Gokush_Human_feces_B_029_Microviridae_AG0417_putative.VP1 290 2e-95 Gokush_Human_feces_B_068_Microviridae_AG0331_putative.VP1 281 1e-91 Gokush_Human_feces_E_009_Microviridae_AG0285_putative.VP1 276 1e-89 Gokush_Human_feces_A_029_Microviridae_AG0226_putative.VP1 272 3e-89 Gokush_Human_feces_A_013_Microviridae_AG009_putative.VP1 272 6e-88 > Gokush_Human_gut_33_003_Microviridae_AG061_putative.VP1 Length=545 Score = 500 bits (1288), Expect = 3e-177, Method: Compositional matrix adjust. Identities = 244/312 (78%), Positives = 275/312 (88%), Gaps = 13/312 (4%) Query 1 MTSNGANHLVPAS---GNTLGAP---KTDEDNGKPRVLLGKDAGGVSTWVPMEARLDNAT 54 + ++GA+ +P S GN+ GAP K+ +GK +V AGG W M A + T Sbjct 241 IDAHGAD--IPGSLIYGNSTGAPGEKKSMMFSGKEKVTNEMGAGG---W--MYADISEVT 293 Query 55 SATINQLRQAISVQQYYEALARGGSRYREQIRAIWDVIISDKTVQVPEYLGGGRYHVNIN 114 +ATIN LR+A++VQQYYEALARGGSRYREQ++A+WDV+ISDKT+Q+PEYLGGGRYHVN+N Sbjct 294 AATINDLRKAVAVQQYYEALARGGSRYREQVQALWDVVISDKTMQIPEYLGGGRYHVNMN 353 Query 115 QIVQTSGQQTSNDTPIGETGAMSVTPINESSFTKSFEEHGFVIGVCCVRHNRSYQQGLER 174 QIVQTSGQQT++DTPIGETGAMSVTPINESSFTKSFEEHGFVIGVCCVRHN SYQQGLER Sbjct 354 QIVQTSGQQTNDDTPIGETGAMSVTPINESSFTKSFEEHGFVIGVCCVRHNHSYQQGLER 413 Query 175 FWSRKDRLDYYVPQFANLGEQPVKKKEIMLTGDTTDDETFGYQEAWADYRMKPNRVSGLM 234 FWSR DRLDYYVPQFANLGEQP+KKKEIMLTG +D+ETFGYQEAWADYRMKPNRVSGLM Sbjct 414 FWSRTDRLDYYVPQFANLGEQPIKKKEIMLTGTASDEETFGYQEAWADYRMKPNRVSGLM 473 Query 235 RSNATGTLEFWHYADNYAKVPTLSQEWMAEGKEEIARTLIVEDEPQFFGAIRIANKTTRR 294 RSNA GTL+FWHYADNY+ VPTLSQEW+AEGKEEIARTLIV++EPQFFGAIRIANKTTRR Sbjct 474 RSNAEGTLDFWHYADNYSTVPTLSQEWIAEGKEEIARTLIVQNEPQFFGAIRIANKTTRR 533 Query 295 MPLYSVPGLYKL 306 MPLYSVPGLYKL Sbjct 534 MPLYSVPGLYKL 545 > Gokush_Human_feces_E_007_Microviridae_AG0412_putative.VP1 Length=573 Score = 468 bits (1203), Expect = 5e-164, Method: Compositional matrix adjust. Identities = 220/261 (84%), Positives = 237/261 (91%), Gaps = 0/261 (0%) Query 46 MEARLDNATSATINQLRQAISVQQYYEALARGGSRYREQIRAIWDVIISDKTVQVPEYLG 105 M ++LDN + TINQLRQA +VQ YYEALARGGSRYREQ+RA++ V ISDKTVQVPEYLG Sbjct 313 MYSKLDNIEATTINQLRQAFAVQHYYEALARGGSRYREQVRALFGVSISDKTVQVPEYLG 372 Query 106 GGRYHVNINQIVQTSGQQTSNDTPIGETGAMSVTPINESSFTKSFEEHGFVIGVCCVRHN 165 GGRYHVN+NQIVQTSGQQT+N+TPIGETGAMSVTPINESSFTKS EEHGF+IGV CVRH+ Sbjct 373 GGRYHVNVNQIVQTSGQQTTNETPIGETGAMSVTPINESSFTKSLEEHGFIIGVLCVRHD 432 Query 166 RSYQQGLERFWSRKDRLDYYVPQFANLGEQPVKKKEIMLTGDTTDDETFGYQEAWADYRM 225 SYQQGLERFWSR DRLDYY PQFANLGEQPVKKKEIMLTG TDDETFGYQEAWADYRM Sbjct 433 HSYQQGLERFWSRSDRLDYYYPQFANLGEQPVKKKEIMLTGTATDDETFGYQEAWADYRM 492 Query 226 KPNRVSGLMRSNATGTLEFWHYADNYAKVPTLSQEWMAEGKEEIARTLIVEDEPQFFGAI 285 KPNRVSG MRSNA GTL+FWHYADNY VPTLSQEWM EGK EIARTL+V+DEPQFFGAI Sbjct 493 KPNRVSGKMRSNAEGTLDFWHYADNYDTVPTLSQEWMNEGKTEIARTLVVQDEPQFFGAI 552 Query 286 RIANKTTRRMPLYSVPGLYKL 306 R+ N+TTR MPLYSVPGL KL Sbjct 553 RVMNETTRCMPLYSVPGLEKL 573 > Gokush_Human_feces_E_017_Microviridae_AG0127_putative.VP1 Length=557 Score = 360 bits (925), Expect = 2e-122, Method: Compositional matrix adjust. Identities = 186/320 (58%), Positives = 218/320 (68%), Gaps = 24/320 (8%) Query 2 TSNGANHLVPASGNTLGAPKTDEDNGKPRVLLGKDAGGVSTWVP---------------M 46 T+N A PASG T D+ + R L+G +A +P M Sbjct 240 TANAA----PASGATAWYETQDKASNGQRTLIGGEAIDNGETLPLVTNFYGAANTGKAYM 295 Query 47 EARLDNATSATINQLRQAISVQQYYEALARGGSRYREQIRAIWDVIISDKTVQVPEYLGG 106 A L N T ATINQLRQA VQ+Y+E LARGGSRYREQI +++ ISDKTVQ+PEYLGG Sbjct 296 GADLSNVTGATINQLRQAFQVQKYFEELARGGSRYREQIYSLFRTRISDKTVQIPEYLGG 355 Query 107 GRYHVNINQIVQTSGQQTSNDTPIGETGAMSVTPINESSFTKSFEEHGFVIGVCCVRHNR 166 R +N+NQ++QTSG T+ +P G AMSVT +S+FTKSFEEHGFVIGVCCVRH+ Sbjct 356 DRIMINMNQVIQTSG--TTETSPQGNVAAMSVTGFGKSAFTKSFEEHGFVIGVCCVRHDH 413 Query 167 SYQQGLERFWSRKDRLDYYVPQFANLGEQPVKKKEIMLTGDTTDDETFGYQEAWADYRMK 226 +YQQGLER +SRK++LDYY P FANLGEQ V KKE+ G TD+E FGYQEAWADYRMK Sbjct 414 TYQQGLERMFSRKNKLDYYFPVFANLGEQAVLKKELYAQGTETDNEAFGYQEAWADYRMK 473 Query 227 PNRVSGLMRSNATGTLEFWHYADNYAKVPTLSQEWMAEGKEEIARTLIVE---DEPQFFG 283 PNR+ G RSNATGTL+ WHY DNY P LSQEWM EG EIARTL VE +EPQF Sbjct 474 PNRICGAFRSNATGTLDTWHYGDNYTNTPALSQEWMKEGSAEIARTLAVENKVNEPQFIA 533 Query 284 AIRIANKTTRRMPLYSVPGL 303 + N T R MP+YSVPGL Sbjct 534 DFLVKNTTVRPMPMYSVPGL 553 > Gokush_Human_feces_A_020_Microviridae_AG0265_putative.VP1 Length=558 Score = 358 bits (919), Expect = 2e-121, Method: Compositional matrix adjust. Identities = 177/273 (65%), Positives = 205/273 (75%), Gaps = 10/273 (4%) Query 37 AGGV---STWVPMEARLDNATSATINQLRQAISVQQYYEALARGGSRYREQIRAIWDVII 93 +GG+ S W M A L AT ATINQLRQA VQ+Y+E LARGGSRYREQI +++ I Sbjct 286 SGGLNNGSAW--MGADLSQATGATINQLRQAFQVQKYFEELARGGSRYREQIYSLFRTRI 343 Query 94 SDKTVQVPEYLGGGRYHVNINQIVQTSGQQTSNDTPIGETGAMSVTPINESSFTKSFEEH 153 SDKTVQ+PEYLGG R +N+NQ++QTSG T+ +P G AMSVT +S+FTKSFEEH Sbjct 344 SDKTVQIPEYLGGDRIMINMNQVIQTSG--TTETSPQGNVAAMSVTGFGKSAFTKSFEEH 401 Query 154 GFVIGVCCVRHNRSYQQGLERFWSRKDRLDYYVPQFANLGEQPVKKKEIMLTGDTTDDET 213 GFVIGVCCVRH+ +YQQGLER +SRK++LDYY P FANLGEQ V KKE+ G TD+E Sbjct 402 GFVIGVCCVRHDHTYQQGLERMFSRKNKLDYYFPVFANLGEQAVLKKELYAQGTDTDNEA 461 Query 214 FGYQEAWADYRMKPNRVSGLMRSNATGTLEFWHYADNYAKVPTLSQEWMAEGKEEIARTL 273 FGYQEAWADYRMKPNR+ G RSNATGTL+ WHY DNY K P LSQEWM EG EIARTL Sbjct 462 FGYQEAWADYRMKPNRICGAFRSNATGTLDSWHYGDNYTKTPALSQEWMKEGSAEIARTL 521 Query 274 IVE---DEPQFFGAIRIANKTTRRMPLYSVPGL 303 VE +EPQF + N T R MP+YSVPGL Sbjct 522 AVENTVNEPQFIADFLVKNTTVRPMPMYSVPGL 554 > Gokush_Human_feces_A_019_Microviridae_AG0438_putative.VP1 Length=569 Score = 355 bits (912), Expect = 2e-120, Method: Compositional matrix adjust. Identities = 174/279 (62%), Positives = 206/279 (74%), Gaps = 7/279 (3%) Query 28 KPRVLLGKDAGGVSTWVPMEARLDNATSATINQLRQAISVQQYYEALARGGSRYREQIRA 87 K + A G S + M A L N T ATINQ+RQA VQ+Y+E LARGGSRYREQI + Sbjct 291 KSTLYFANGASGGSAF--MGADLSNVTGATINQIRQAFQVQKYFEELARGGSRYREQIYS 348 Query 88 IWDVIISDKTVQVPEYLGGGRYHVNINQIVQTSGQQTSNDTPIGETGAMSVTPINESSFT 147 ++ ISDKTVQ+PEYLGG R +N++Q+VQTSG T++ +P G AMSVT +S+FT Sbjct 349 LFRTRISDKTVQIPEYLGGDRIMINMSQVVQTSG--TTDVSPQGNVSAMSVTGFGKSAFT 406 Query 148 KSFEEHGFVIGVCCVRHNRSYQQGLERFWSRKDRLDYYVPQFANLGEQPVKKKEIMLTGD 207 KSFEEHGF+IGVCCVRH+ +YQQGLER +SRK++LDYY P FANLGEQ V KKE+ G Sbjct 407 KSFEEHGFIIGVCCVRHDHTYQQGLERMFSRKNKLDYYFPVFANLGEQAVLKKELYAQGT 466 Query 208 TTDDETFGYQEAWADYRMKPNRVSGLMRSNATGTLEFWHYADNYAKVPTLSQEWMAEGKE 267 TD+E FGYQE WADYRMKPNR+ G RSNATGTL+ WHY DNY+ P LSQEWM EG Sbjct 467 ETDNEAFGYQECWADYRMKPNRICGAFRSNATGTLDSWHYGDNYSNTPALSQEWMKEGSA 526 Query 268 EIARTLIVE---DEPQFFGAIRIANKTTRRMPLYSVPGL 303 EIARTL VE +EPQF I + N T R MP+YSVPGL Sbjct 527 EIARTLAVENKVNEPQFIADILVKNTTVRPMPMYSVPGL 565 > Gokush_Human_feces_B_029_Microviridae_AG0417_putative.VP1 Length=530 Score = 290 bits (743), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 145/292 (50%), Positives = 189/292 (65%), Gaps = 10/292 (3%) Query 12 ASGNTLGAPKTDEDNGKPRVLLGKDAGGVSTWVPMEARLDNATSATINQLRQAISVQQYY 71 AS + K DE G A G+ + A L TSATINQLRQA +Q+ Sbjct 245 ASAEPIDVAKIDE--------TGTLAKGLPKASYIGADLSAVTSATINQLRQAFQIQKLL 296 Query 72 EALARGGSRYREQIRAIWDVIISDKTVQVPEYLGGGRYHVNINQIVQTSGQQTSNDTPIG 131 E ARGG+RYRE +R + VI D +Q+PEYLGG R +N++Q++QTS T + +P+G Sbjct 297 EKDARGGTRYREVLREHFGVISPDSRMQIPEYLGGYRLPINVSQVIQTSS--TDSTSPLG 354 Query 132 ETGAMSVTPINESSFTKSFEEHGFVIGVCCVRHNRSYQQGLERFWSRKDRLDYYVPQFAN 191 T A+SVT +N+ FTKSF EHGF++G+ VR +++YQQG+ER WSRK R DYY P AN Sbjct 355 NTAALSVTTMNKPMFTKSFTEHGFIMGLAVVRTDQTYQQGIERMWSRKGRYDYYWPVLAN 414 Query 192 LGEQPVKKKEIMLTGDTTDDETFGYQEAWADYRMKPNRVSGLMRSNATGTLEFWHYADNY 251 +GEQ + KEI G D+E FGYQEAWADYR KP++V+ L RSNA +L+ WHYA +Y Sbjct 415 IGEQAILNKEIYAQGSAKDEEAFGYQEAWADYRYKPSKVTALFRSNAQQSLDAWHYAQDY 474 Query 252 AKVPTLSQEWMAEGKEEIARTLIVEDEPQFFGAIRIANKTTRRMPLYSVPGL 303 ++PTLS WM + E+ RTL D+P F NKTTR MP+YS+PGL Sbjct 475 NELPTLSTAWMEQSNAEMKRTLARSDQPDFIADFYFMNKTTRCMPVYSIPGL 526 > Gokush_Human_feces_B_068_Microviridae_AG0331_putative.VP1 Length=547 Score = 281 bits (718), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 140/259 (54%), Positives = 173/259 (67%), Gaps = 4/259 (2%) Query 48 ARLDNAT-SATINQLRQAISVQQYYEALARGGSRYREQIRAIWDVIISDKTVQVPEYLGG 106 A+ D + +ATINQLR A +Q+ YE ARGG+RY E +++ + V D +Q PEYLGG Sbjct 286 AKFDGVSQAATINQLRLAFQIQKLYERDARGGTRYIEILKSHFGVTSPDARLQRPEYLGG 345 Query 107 GRYHVNINQIVQTSGQQTSNDTPIGETGAMSVTPINESSFTKSFEEHGFVIGVCCVRHNR 166 R +NINQ+VQ+S S TP G T A S+T N S FTKSF EHGF+IGV R+ Sbjct 346 NRIPININQVVQSSSTDASG-TPQGNTAAYSLTSDNHSDFTKSFVEHGFLIGVMVARYRH 404 Query 167 SYQQGLERFWSRKDRLDYYVPQFANLGEQPVKKKEIMLTGDTTDDETFGYQEAWADYRMK 226 +YQQGLERFWSRKDR DYY P FAN+GEQ +K KEI G DDE FGYQEAWADYR + Sbjct 405 TYQQGLERFWSRKDRFDYYFPVFANIGEQAIKNKEIYAQGTVKDDEVFGYQEAWADYRYR 464 Query 227 PNRVSGLMRSNATGTLEFWHYADNYAKVPTLSQEWMAEGKEEIARTLIVED--EPQFFGA 284 PNRV+G MRS+A +L+ WH D+Y +P+LS W+ E + + R L V D Q F Sbjct 465 PNRVTGEMRSSAPQSLDVWHLGDDYESLPSLSDSWIREDSKTVNRVLAVSDNVSAQLFCD 524 Query 285 IRIANKTTRRMPLYSVPGL 303 I + N TR MPLYS+PGL Sbjct 525 IYVRNLCTRPMPLYSIPGL 543 > Gokush_Human_feces_E_009_Microviridae_AG0285_putative.VP1 Length=559 Score = 276 bits (706), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 137/258 (53%), Positives = 167/258 (65%), Gaps = 3/258 (1%) Query 48 ARLDNATSATINQLRQAISVQQYYEALARGGSRYREQIRAIWDVIISDKTVQVPEYLGGG 107 A L ATSATINQLR A +Q+ YE ARGG+RY E ++ + V D +Q PEYLGG Sbjct 299 ADLSTATSATINQLRLAFQIQKLYEKDARGGTRYTEILKTHFGVTSPDSRLQRPEYLGGN 358 Query 108 RYHVNINQIVQTSGQQTSNDTPIGETGAMSVTPINESSFTKSFEEHGFVIGVCCVRHNRS 167 R +NINQ+VQ S +TP+G SVT S F +SF EHGFVIGV R++ + Sbjct 359 RVPININQVVQNSAT-VEGETPLGNVAGYSVTSDTHSDFRQSFTEHGFVIGVMVARYDHT 417 Query 168 YQQGLERFWSRKDRLDYYVPQFANLGEQPVKKKEIMLTGDTTDDETFGYQEAWADYRMKP 227 YQQG+ERFWSRK R DYY P AN+GEQ V KEI G DDE FGYQEAW DYR KP Sbjct 418 YQQGIERFWSRKTRFDYYWPVLANIGEQAVLNKEIYAQGTAEDDEVFGYQEAWGDYRYKP 477 Query 228 NRVSGLMRSNATGTLEFWHYADNYAKVPTLSQEWMAEGKEEIARTLIV--EDEPQFFGAI 285 NRV+G MRS +L+ WH D+Y K+P+LS EW+ E K + R L V + Q F + Sbjct 478 NRVTGEMRSQYAQSLDVWHLGDDYTKLPSLSSEWIVEDKTNVDRVLAVTSTNANQLFADL 537 Query 286 RIANKTTRRMPLYSVPGL 303 I N+TTR MP+YS+PGL Sbjct 538 YINNQTTRPMPMYSIPGL 555 > Gokush_Human_feces_A_029_Microviridae_AG0226_putative.VP1 Length=470 Score = 272 bits (696), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 143/274 (52%), Positives = 175/274 (64%), Gaps = 16/274 (6%) Query 32 LLGKDAGGVSTWVPMEARLDNATSATINQLRQAISVQQYYEALARGGSRYREQIRAIWDV 91 L+ D GGVS ATINQLR A +Q+ YE ARGG+RY E +++ + V Sbjct 207 LIAVDDGGVSM-------------ATINQLRLAFQIQKLYERDARGGTRYIEILKSHFGV 253 Query 92 IISDKTVQVPEYLGGGRYHVNINQIVQTSGQQTSNDTPIGETGAMSVTPINESSFTKSFE 151 D +Q PEYLGG R + INQ+VQ SG S +TP G T A S+T FTKSF Sbjct 254 TSPDARLQRPEYLGGNRIPITINQVVQNSGTM-SGETPQGTTTAYSLTTDVHQEFTKSFV 312 Query 152 EHGFVIGVCCVRHNRSYQQGLERFWSRKDRLDYYVPQFANLGEQPVKKKEIMLTGDTTDD 211 EHGF+IGV R++ +YQQGLERFWSRKDR D+Y P FAN+GEQ + KEI TG +D Sbjct 313 EHGFIIGVMVARYDHTYQQGLERFWSRKDRFDFYWPVFANIGEQAILNKEIYATGKDSDS 372 Query 212 ETFGYQEAWADYRMKPNRVSGLMRSNATGTLEFWHYADNYAKVPTLSQEWMAEGKEEIAR 271 E FGYQEAWADYR KP+RVSG MRSNA L+ WH AD+Y +PTLS W+ E + R Sbjct 373 EVFGYQEAWADYRYKPSRVSGEMRSNAKTPLDSWHLADDYDVLPTLSDSWIREESNNVNR 432 Query 272 TLIVEDE--PQFFGAIRIANKTTRRMPLYSVPGL 303 L V E Q F + + N+TTR MP+YS+PGL Sbjct 433 VLAVTSEVSNQLFCDLYVQNRTTRPMPVYSIPGL 466 > Gokush_Human_feces_A_013_Microviridae_AG009_putative.VP1 Length=587 Score = 272 bits (696), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 136/257 (53%), Positives = 171/257 (67%), Gaps = 4/257 (2%) Query 51 DNATS-ATINQLRQAISVQQYYEALARGGSRYREQIRAIWDVIISDKTVQVPEYLGGGRY 109 D A S ATINQLR A +Q++YE ARGGSRY E IR+ + V D +Q PEYLGG R Sbjct 327 DGAVSVATINQLRLAFQIQKFYERQARGGSRYTEVIRSFFGVTSPDARLQRPEYLGGNRV 386 Query 110 HVNINQIVQ-TSGQQTSNDTPIGETGAMSVTPINESSFTKSFEEHGFVIGVCCVRHNRSY 168 +NINQ++Q + S+ TP G MS T S FTKSF EHGF+IGV R++ +Y Sbjct 387 PININQVIQQSGTGSESSSTPQGTVVGMSQTTDTNSDFTKSFTEHGFIIGVMVARYDHTY 446 Query 169 QQGLERFWSRKDRLDYYVPQFANLGEQPVKKKEIMLTGDTTDDETFGYQEAWADYRMKPN 228 QQGL+R WSRKD+ D+Y P FAN+GEQ +K KE+ G DDE FGYQEAWA+YR KPN Sbjct 447 QQGLDRLWSRKDKFDFYWPVFANIGEQAIKNKELYAQGTAEDDEVFGYQEAWAEYRYKPN 506 Query 229 RVSGLMRSNATGTLEFWHYADNYAKVPTLSQEWMAEGKEEIARTLIVEDE--PQFFGAIR 286 RV+G MRS+ +L+ WH AD+Y+K+P+LS EW+ E + R L D QFF I Sbjct 507 RVTGEMRSSYAKSLDIWHLADDYSKLPSLSAEWIQEDSSTVNRVLAASDNLAAQFFADIY 566 Query 287 IANKTTRRMPLYSVPGL 303 + N TR MP+YS+PGL Sbjct 567 VKNLCTRPMPMYSIPGL 583 Lambda K H a alpha 0.315 0.132 0.395 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 25785158