bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: Microviridae_proteins.fasta
           575 sequences; 147,441 total letters





Query= Contig-43_CDS_annotation_glimmer3.pl_2_2

Length=139
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Gokush_Human_gut_33_003_Microviridae_AG062_putative.VP2             79.7    2e-20
  Gokush_Human_feces_E_007_Microviridae_AG0410_putative.VP2           76.3    2e-19
  Gokush_Human_feces_B_029_Microviridae_AG0418_putative.VP2           44.7    5e-08
  Alpavirinae_Human_gut_31_037_Microviridae_AG0294_putative.VP2       23.5    0.83
  Gokush_Bourget_248_Microviridae_AG0249_putative.VP4                 20.4    7.0


> Gokush_Human_gut_33_003_Microviridae_AG062_putative.VP2
Length=295

 Score = 79.7 bits (195),  Expect = 2e-20, Method: Compositional matrix adjust.
 Identities = 39/62 (63%), Positives = 49/62 (79%), Gaps = 0/62 (0%)

Query  64   TNDEQVMQYLKGAYQYQNAEGQRQSQFNQRSMLEQMGYNTLGAIAQGIYNHIENSAAMNF  123
            TNDEQ+M+YL   Y +Q  +   QS+ N+++ML QMGYNTLGAI QGIYNHIE +AAMN+
Sbjct  70   TNDEQIMKYLDRFYAWQGGQNAFQSKTNRQNMLMQMGYNTLGAIQQGIYNHIEQNAAMNY  129

Query  124  NS  125
            NS
Sbjct  130  NS  131


> Gokush_Human_feces_E_007_Microviridae_AG0410_putative.VP2
Length=270

 Score = 76.3 bits (186),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 38/62 (61%), Positives = 48/62 (77%), Gaps = 0/62 (0%)

Query  64   TNDEQVMQYLKGAYQYQNAEGQRQSQFNQRSMLEQMGYNTLGAIAQGIYNHIENSAAMNF  123
            TND+Q+M YL   YQ+Q  +   QS+ N+++ML QMGYNTL AI QGIYNHIEN+AAM +
Sbjct  67   TNDKQIMDYLNRYYQWQGGQNAFQSKTNRQNMLMQMGYNTLSAIQQGIYNHIENNAAMQY  126

Query  124  NS  125
            NS
Sbjct  127  NS  128


> Gokush_Human_feces_B_029_Microviridae_AG0418_putative.VP2
Length=272

 Score = 44.7 bits (104),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 3/59 (5%)

Query  67   EQVMQYLKGAYQYQNAEGQRQSQFNQRSMLEQMGYNTLGAIAQGIYNHIENSAAMNFNS  125
            + + +Y  G  Q Q A+G +  Q N+ S++  +G NTLGAI QG+YN I+  AAM++NS
Sbjct  72   KDLAKYFLG--QSQQAQGMQSLQNNKNSLMA-LGLNTLGAIQQGVYNRIQQDAAMSYNS  127


> Alpavirinae_Human_gut_31_037_Microviridae_AG0294_putative.VP2
Length=360

 Score = 23.5 bits (49),  Expect = 0.83, Method: Compositional matrix adjust.
 Identities = 7/24 (29%), Positives = 20/24 (83%), Gaps = 3/24 (13%)

Query  87   QSQFNQRSM---LEQMGYNTLGAI  107
            ++ +N+++M   +E++GY+T+G++
Sbjct  211  EADYNEKTMDTRIEKVGYDTMGSL  234


> Gokush_Bourget_248_Microviridae_AG0249_putative.VP4
Length=299

 Score = 20.4 bits (41),  Expect = 7.0, Method: Compositional matrix adjust.
 Identities = 7/29 (24%), Positives = 13/29 (45%), Gaps = 0/29 (0%)

Query  86   RQSQFNQRSMLEQMGYNTLGAIAQGIYNH  114
            R+ +F + S+   +GY         +Y H
Sbjct  201  RKPEFTKMSLKPGIGYEWYKKYTSDVYPH  229



Lambda      K        H        a         alpha
   0.315    0.125    0.353    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 8764548