bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-4_CDS_annotation_glimmer3.pl_2_1
Length=153
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.p... 63.9 5e-15
Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.... 50.8 1e-10
Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.p... 32.7 2e-04
Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.... 32.0 3e-04
Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.p... 30.4 0.003
Alpavirinae_Human_feces_A_034_Microviridae_AG0103_hypothetical.... 27.3 0.014
Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.p... 25.4 0.060
Alpavirinae_Human_feces_A_032_Microviridae_AG0219_putative.VP2 24.6 0.45
Alpavirinae_Human_feces_D_008_Microviridae_AG0100_putative.VP4 23.9 0.85
Alpavirinae_Human_feces_D_031_Microviridae_AG0423_putative.VP4 23.1 1.5
> Alpavirinae_Human_gut_33_005_Microviridae_AG0181_hypothetical.protein
Length=205
Score = 63.9 bits (154), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/109 (35%), Positives = 57/109 (52%), Gaps = 5/109 (5%)
Query 17 ILHTKVPVQDKLMQLSTVVNKDGSIVISNDISLIFNQQRLENKLTASELREYIQRYTPNK 76
IL PV D L N DGS+ +D ++F Q+ ++N + +LR Y+ P
Sbjct 79 ILPEPNPVGDFLFDH----NADGSVTFCSDYGILFGQKAIDN-MNQVQLRRYMNSLVPRS 133
Query 77 SVYTAQLDDDTLLNTLKSRHIQSLSEMRSWAEYCMENYDSLIKDVEEKA 125
S YT +DD LL+ K R+IQS +EM SW ++ + SL D++ A
Sbjct 134 SNYTRNYNDDFLLDYCKDRNIQSATEMASWLDHLLSEGQSLESDLQAYA 182
> Alpavirinae_Human_feces_D_031_Microviridae_AG0422_hypothetical.protein
Length=150
Score = 50.8 bits (120), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (52%), Gaps = 0/87 (0%)
Query 31 LSTVVNKDGSIVISNDISLIFNQQRLENKLTASELREYIQRYTPNKSVYTAQLDDDTLLN 90
L V + DG I +D++L+ N +RL N++ I+ P KS Y + D+ L
Sbjct 36 LRYVKDDDGVIRYVSDVNLLMNAERLRNQIGEESYLNLIRGIQPKKSPYDNKYTDEQLFT 95
Query 91 TLKSRHIQSLSEMRSWAEYCMENYDSL 117
+KSR IQ+ SE+ +W E DS+
Sbjct 96 AIKSRFIQTPSEVLAWIESLGSAGDSI 122
> Alpavirinae_Human_gut_22_017_Microviridae_AG0398_hypothetical.protein
Length=69
Score = 32.7 bits (73), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%), Gaps = 0/25 (0%)
Query 83 LDDDTLLNTLKSRHIQSLSEMRSWA 107
+ DD LL T++SRHIQ+ SE+ +W+
Sbjct 4 MSDDDLLATVRSRHIQAPSEIIAWS 28
> Alpavirinae_Human_feces_C_043_Microviridae_AG0323_hypothetical.protein
Length=59
Score = 32.0 bits (71), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (68%), Gaps = 0/34 (0%)
Query 89 LNTLKSRHIQSLSEMRSWAEYCMENYDSLIKDVE 122
+ T+KSR++QS SE+R+W E ++ D + D E
Sbjct 1 METIKSRYLQSPSEVRAWLETLVDKADVVRSDYE 34
> Alpavirinae_Human_gut_33_017_Microviridae_AG0155_hypothetical.protein
Length=171
Score = 30.4 bits (67), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 20/25 (80%), Gaps = 0/25 (0%)
Query 83 LDDDTLLNTLKSRHIQSLSEMRSWA 107
+ D+ LL T++SR+IQS SE+ +W+
Sbjct 106 MSDEDLLATVRSRYIQSPSEILAWS 130
> Alpavirinae_Human_feces_A_034_Microviridae_AG0103_hypothetical.protein
Length=62
Score = 27.3 bits (59), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (61%), Gaps = 0/33 (0%)
Query 89 LNTLKSRHIQSLSEMRSWAEYCMENYDSLIKDV 121
+ K R+IQS +EM++W E+ + SL DV
Sbjct 1 MEYCKDRNIQSYTEMQAWLEHLISEGQSLEGDV 33
> Alpavirinae_Human_feces_A_021_Microviridae_AG078_hypothetical.protein
Length=63
Score = 25.4 bits (54), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 7/21 (33%), Positives = 18/21 (86%), Gaps = 0/21 (0%)
Query 89 LNTLKSRHIQSLSEMRSWAEY 109
++ +K R++QS +E+++W+E+
Sbjct 1 MSLIKPRNVQSHAELKAWSEF 21
> Alpavirinae_Human_feces_A_032_Microviridae_AG0219_putative.VP2
Length=355
Score = 24.6 bits (52), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 31/68 (46%), Gaps = 7/68 (10%)
Query 53 QQRLEN-KLTASELRE---YIQRYTPNKSVYT--AQLDDDTLLNTLKSRHIQSLSEMRSW 106
+Q++EN K TA E IQ NK V T AQ DD + N +KS + W
Sbjct 191 EQKIENLKKTAQATEESIKLIQANVANKEVQTRIAQFQDD-MNNIIKSSVWYEDGKSHGW 249
Query 107 AEYCMENY 114
E +E Y
Sbjct 250 EETVVERY 257
> Alpavirinae_Human_feces_D_008_Microviridae_AG0100_putative.VP4
Length=532
Score = 23.9 bits (50), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
Query 1 MKKKEYIDHVFNGSFDILHTKVPVQDKLMQLST----VVNKDGSIVISNDISLIFNQQRL 56
M ++E+I VF+ + TK P +L+ + + SI+ N + + Q L
Sbjct 1 MNQQEFIQKVFSMCQHQVQTKNPYTGELIMVPCGTCPACRFNKSILSQNKV----HAQSL 56
Query 57 ENKLTASELREYIQRYTPNKSVYTAQLDDDTLLNTLKSR 95
++ Y QRY P LD D L T R
Sbjct 57 ISRHVYFVTLTYAQRYIPYYEYEIEALDADFLAITAHCR 95
> Alpavirinae_Human_feces_D_031_Microviridae_AG0423_putative.VP4
Length=532
Score = 23.1 bits (48), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query 1 MKKKEYIDHVFNGSFDILHTKVPVQDKLMQLST----VVNKDGSIVISNDISLIFNQQRL 56
M ++E+I VF+ + TK P +L+ + + SI+ N + + Q L
Sbjct 1 MNQQEFIQKVFSMCQHQVQTKNPYTGELIMVPCGTCPACRFNKSILSQNKV----HAQSL 56
Query 57 ENKLTASELREYIQRYTPNKSVYTAQLDDDTLLNT 91
++ Y QRY P LD D L T
Sbjct 57 VSRHVYFVTLTYAQRYIPYYEYEIEALDADFLAIT 91
Lambda K H a alpha
0.314 0.129 0.352 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 10172981