bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-5_CDS_annotation_glimmer3.pl_2_2
Length=84
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_C_010_Microviridae_AG0200_hypothetical.... 65.9 9e-17
Alpavirinae_Human_gut_21_005_Microviridae_AG014_hypothetical.pr... 62.0 2e-15
Microvirus_gi|89888610|ref|YP_512370.1|_gpB_[Enterobacteria_pha... 21.6 1.1
Alpavirinae_Human_feces_B_023_Microviridae_AG0144_hypothetical.... 20.4 3.0
Microvirus_gi|9626340|ref|NP_040672.1|_capsid_morphogenesis_pro... 20.4 3.3
Alpavirinae_Human_gut_31_037_Microviridae_AG0294_putative.VP2 20.0 5.7
Gokush_Human_feces_E_007_Microviridae_AG0412_putative.VP1 19.6 6.3
Alpavirinae_Human_feces_D_015_Microviridae_AG018_hypothetical.p... 19.2 8.8
Gokush_SectLung2LLL_002_Microviridae_AG0240_putative.VP1 19.2 9.5
> Alpavirinae_Human_feces_C_010_Microviridae_AG0200_hypothetical.protein
Length=127
Score = 65.9 bits (159), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query 4 TKPDLAITPSQVQELTNKGISVSLPNAKQFLDGNSLETAKSWNVDPIFRRDANICTMFEL 63
TKP+L +TP QV E+ +GI VS P F+D N SWN++P FRRD ++ T +E+
Sbjct 45 TKPNLGLTPQQVAEMAKRGIPVS-PMNVNFIDVNG---DASWNIEPQFRRDMDMATAWEM 100
Query 64 ERDSQGKIIRAHKVDRKKFGD 84
E+ SQ K ++ + +KKFGD
Sbjct 101 EKASQRKALQVLR--QKKFGD 119
> Alpavirinae_Human_gut_21_005_Microviridae_AG014_hypothetical.protein
Length=107
Score = 62.0 bits (149), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (63%), Gaps = 6/81 (7%)
Query 4 TKPDLAITPSQVQELTNKGISVSLPNAKQFLDGNSLETAKSWNVDPIFRRDANICTMFEL 63
TKP+L +TP QV E+ +GI VS P F+D N SWN++P F RD ++ T +E+
Sbjct 25 TKPNLGLTPQQVAEMAKRGIPVS-PMNVNFIDVNG---DASWNIEPQFCRDMDMATAWEM 80
Query 64 ERDSQGKIIRAHKVDRKKFGD 84
E+ SQ K ++ + +KKFGD
Sbjct 81 EKASQRKALQVLR--QKKFGD 99
> Microvirus_gi|89888610|ref|YP_512370.1|_gpB_[Enterobacteria_phage_ID2_Moscow/ID/2001]
Length=120
Score = 21.6 bits (44), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/69 (29%), Positives = 28/69 (41%), Gaps = 11/69 (16%)
Query 15 VQELTNKGISVSLPNAKQFLDGNSLETAKSWNVDPIFRRDANICTMFELERDSQGKIIRA 74
V +L N+ P L GNS T S RRD + E ER + I
Sbjct 22 VSQLRNEAAHNESP-----LSGNSNPTDPSG-----LRRDP-VQQHLEAERQERATIEAG 70
Query 75 HKVDRKKFG 83
++ R++FG
Sbjct 71 KEICRRRFG 79
> Alpavirinae_Human_feces_B_023_Microviridae_AG0144_hypothetical.protein
Length=87
Score = 20.4 bits (41), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 7/12 (58%), Positives = 10/12 (83%), Gaps = 0/12 (0%)
Query 69 GKIIRAHKVDRK 80
G++I AHKVD +
Sbjct 56 GEMIEAHKVDEQ 67
> Microvirus_gi|9626340|ref|NP_040672.1|_capsid_morphogenesis_protein_[Enterobacteria_phage_G4_sensu_lato]
Length=120
Score = 20.4 bits (41), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/38 (32%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query 47 VDPI-FRRDANICTMFELERDSQGKIIRAHKVDRKKFG 83
DP RRD + E ER + +I ++ R++FG
Sbjct 43 TDPSGLRRDP-VQQHLEAERQERAQIEAGKEICRRRFG 79
> Alpavirinae_Human_gut_31_037_Microviridae_AG0294_putative.VP2
Length=360
Score = 20.0 bits (40), Expect = 5.7, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 13/20 (65%), Gaps = 0/20 (0%)
Query 13 SQVQELTNKGISVSLPNAKQ 32
SQ+ E T GI + L NA++
Sbjct 122 SQIIESTGMGIQLGLMNAQK 141
> Gokush_Human_feces_E_007_Microviridae_AG0412_putative.VP1
Length=573
Score = 19.6 bits (39), Expect = 6.3, Method: Composition-based stats.
Identities = 6/12 (50%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
Query 51 FRRDANICTMFE 62
F+RD N+ T F+
Sbjct 22 FKRDQNVLTTFD 33
> Alpavirinae_Human_feces_D_015_Microviridae_AG018_hypothetical.protein.BACEGG.02723
Length=427
Score = 19.2 bits (38), Expect = 8.8, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 21/40 (53%), Gaps = 1/40 (3%)
Query 5 KPDLAITPSQVQELTNKGISVSLPNAKQFLDGNSLETAKS 44
+ DL + + +EL N+G + + A++ L L A++
Sbjct 256 QADLNVKAAHYEELINRG-QLHVVEARELLSREVLNYARA 294
> Gokush_SectLung2LLL_002_Microviridae_AG0240_putative.VP1
Length=540
Score = 19.2 bits (38), Expect = 9.5, Method: Composition-based stats.
Identities = 8/29 (28%), Positives = 16/29 (55%), Gaps = 2/29 (7%)
Query 21 KGISVSLPNAKQFL--DGNSLETAKSWNV 47
KG + +AK ++ DG+ T+ W++
Sbjct 226 KGTTAPATSAKDYIVTDGSGYVTSSGWDI 254
Lambda K H a alpha
0.317 0.133 0.383 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3625946