bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-8_CDS_annotation_glimmer3.pl_2_8
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_C_010_Microviridae_AG0197_hypothetical.... 185 3e-59
Alpavirinae_Human_gut_21_005_Microviridae_AG012_hypothetical.pr... 170 2e-53
Alpavirinae_Human_gut_22_017_Microviridae_AG0396_hypothetical.p... 50.4 6e-10
Pichovirinae_Pavin_279_Microviridae_AG0269_hypothetical.protein... 50.1 8e-10
Pichovirinae_Pavin_723_Microviridae_AG0326_hypothetical.protein... 48.9 1e-09
Alpavirinae_Human_feces_B_007_Microviridae_AG069_hypothetical.p... 48.5 3e-09
Pichovirinae_66_Microbialites_001_Microviridae_AG0133_hypotheti... 47.0 7e-09
Alpavirinae_Human_gut_33_017_Microviridae_AG0156_putative.VP2 47.0 9e-09
Pichovirinae_59_Coral_002_Microviridae_AG0342_hypothetical.prot... 46.2 1e-08
Pichovirinae_JCVI_003_Microviridae_AG0346_hypothetical.protein.... 44.7 4e-08
> Alpavirinae_Human_feces_C_010_Microviridae_AG0197_hypothetical.protein.BACPLE
Length=382
Score = 185 bits (470), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/140 (97%), Positives = 138/140 (99%), Gaps = 0/140 (0%)
Query 1 MPSPaagaaagaaagSVVPgigtaigaiggaaisaigNWFGNRSNRKASREAFERESKFA 60
MPSPAAGAAAGAAAGSVVPGIGTAIGAIGGAAISAIGNWFGNRSNRKAS EAFERESKFA
Sbjct 1 MPSPAAGAAAGAAAGSVVPGIGTAIGAIGGAAISAIGNWFGNRSNRKASAEAFERESKFA 60
Query 61 REERLAQQQWIEQMYEKNNSYNSPAAQMQRLKDAGLNPDLMYSRGDVGNatapeapaqap 120
REERLAQQQWIEQMYEKNNSYNSPAAQMQRLK+AGLNPDLMYSRGDVGNATAPEAPAQAP
Sbjct 61 REERLAQQQWIEQMYEKNNSYNSPAAQMQRLKEAGLNPDLMYSRGDVGNATAPEAPAQAP 120
Query 121 tpRYNVIPTNTYGQTAQISC 140
TPRYNVIPTNTYGQTAQI+
Sbjct 121 TPRYNVIPTNTYGQTAQIAA 140
> Alpavirinae_Human_gut_21_005_Microviridae_AG012_hypothetical.protein.BACPLE
Length=383
Score = 170 bits (430), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 94/103 (91%), Positives = 100/103 (97%), Gaps = 0/103 (0%)
Query 38 NWFGNRSNRKASREAFERESKFAREERLAQQQWIEQMYEKNNSYNSPAAQMQRLKDAGLN 97
++FGN+SNRK S EAFERESKFAREERLAQQQWIEQMYEKNNSYNSPAAQMQRLK+AGLN
Sbjct 39 SFFGNKSNRKQSAEAFERESKFAREERLAQQQWIEQMYEKNNSYNSPAAQMQRLKEAGLN 98
Query 98 PDLMYSRGDVGNatapeapaqaptpRYNVIPTNTYGQTAQISC 140
PDLMYSRGDVGNATAPEAPAQAPTPR+NVIPTNTYGQTAQI+
Sbjct 99 PDLMYSRGDVGNATAPEAPAQAPTPRFNVIPTNTYGQTAQIAA 141
> Alpavirinae_Human_gut_22_017_Microviridae_AG0396_hypothetical.protein.BACPLE
Length=386
Score = 50.4 bits (119), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (71%), Gaps = 2/48 (4%)
Query 63 ERLAQQQ--WIEQMYEKNNSYNSPAAQMQRLKDAGLNPDLMYSRGDVG 108
ER+A QQ W E M+ K N+YN+ +AQ QRL++AGLNP LM + G G
Sbjct 47 ERMAIQQRNWQENMWNKENAYNTASAQRQRLEEAGLNPYLMMNGGSAG 94
> Pichovirinae_Pavin_279_Microviridae_AG0269_hypothetical.protein.BACPLE
Length=292
Score = 50.1 bits (118), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/63 (48%), Positives = 35/63 (56%), Gaps = 11/63 (17%)
Query 40 FGNRSNRKASREAFERESKFAREERLAQQQWIEQMYEKNNSYNSPAAQMQRLKDAGLNPD 99
NR NRK + + E ++A E+ AQ N YNSPAAQ QRLKDA LNP
Sbjct 43 MTNRKNRKFAIQIMNTERQWALEDAAAQ-----------NVYNSPAAQKQRLKDAELNPS 91
Query 100 LMY 102
LMY
Sbjct 92 LMY 94
> Pichovirinae_Pavin_723_Microviridae_AG0326_hypothetical.protein.BACEGG.02723
Length=266
Score = 48.9 bits (115), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/64 (44%), Positives = 40/64 (63%), Gaps = 11/64 (17%)
Query 39 WFGNRSNRKASREAFERESKFAREERLAQQQWIEQMYEKNNSYNSPAAQMQRLKDAGLNP 98
+ N N+K S+E ++R+ R + L Q W +K N YNSP+ QMQR K+AGLNP
Sbjct 25 LYTNAQNKKFSQEMYDRQ----RADAL--QDW-----DKQNKYNSPSQQMQRYKEAGLNP 73
Query 99 DLMY 102
+L+Y
Sbjct 74 NLIY 77
> Alpavirinae_Human_feces_B_007_Microviridae_AG069_hypothetical.protein.BACEGG.02723
Length=383
Score = 48.5 bits (114), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/59 (46%), Positives = 32/59 (54%), Gaps = 11/59 (19%)
Query 61 REERLAQQQWIEQM---YEKNN--------SYNSPAAQMQRLKDAGLNPDLMYSRGDVG 108
+EE + W E+M Y N SYNSP+ M RLKDAGLNPDL+Y G G
Sbjct 48 KEENAQARAWSEKMARWYANNERANLADERSYNSPSTVMSRLKDAGLNPDLIYGNGAAG 106
> Pichovirinae_66_Microbialites_001_Microviridae_AG0133_hypothetical.protein.BACEGG.02723
Length=275
Score = 47.0 bits (110), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 20/31 (65%), Positives = 23/31 (74%), Gaps = 0/31 (0%)
Query 79 NSYNSPAAQMQRLKDAGLNPDLMYSRGDVGN 109
N YN P QMQR KDAGLNP L+Y +G+ GN
Sbjct 44 NEYNLPINQMQRFKDAGLNPHLIYGQGNAGN 74
> Alpavirinae_Human_gut_33_017_Microviridae_AG0156_putative.VP2
Length=353
Score = 47.0 bits (110), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (71%), Gaps = 2/48 (4%)
Query 63 ERLAQQQ--WIEQMYEKNNSYNSPAAQMQRLKDAGLNPDLMYSRGDVG 108
ER+A QQ + E M+ K N+YN+ +AQ QRL++AGLNP LM + G G
Sbjct 47 ERMAMQQRDFQENMWNKENTYNTASAQRQRLEEAGLNPYLMMNGGSSG 94
> Pichovirinae_59_Coral_002_Microviridae_AG0342_hypothetical.protein.BACEGG.02723
Length=233
Score = 46.2 bits (108), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query 63 ERLAQQQWIEQMYEKNNSYNSPAAQMQRLKDAGLNPDLMYSRG 105
+ LA +Q +E + N YN+P AQM+RLK+AGLNP+L+Y G
Sbjct 27 QNLANRQNVE-FWNMQNKYNTPKAQMERLKEAGLNPNLIYGSG 68
> Pichovirinae_JCVI_003_Microviridae_AG0346_hypothetical.protein.BACEGG.02723
Length=252
Score = 44.7 bits (104), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (68%), Gaps = 2/56 (4%)
Query 49 SREAFERESKFAREERLAQQQWIEQM--YEKNNSYNSPAAQMQRLKDAGLNPDLMY 102
+R + +R+ + A EE++ ++Q + + +++ YNSP QMQRLK+AGLNP L Y
Sbjct 24 TRTSTDRKEQRAYEEQIYERQRKDALEDWQRTTDYNSPEQQMQRLKEAGLNPKLAY 79
Lambda K H a alpha
0.313 0.126 0.375 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 8876914