bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: Microviridae_proteins.fasta
575 sequences; 147,441 total letters
Query= Contig-9_CDS_annotation_glimmer3.pl_2_4
Length=50
Score E
Sequences producing significant alignments: (Bits) Value
Alpavirinae_Human_feces_C_029_Microviridae_AG0110_hypothetical.... 61.2 4e-16
Alpavirinae_Human_feces_A_048_Microviridae_AG088_hypothetical.p... 38.1 2e-07
Alpavirinae_Human_feces_B_020_Microviridae_AG0354_hypothetical.... 32.3 2e-05
Alpavirinae_Human_feces_C_010_Microviridae_AG0197_hypothetical.... 20.4 1.1
Alpavirinae_Human_gut_21_005_Microviridae_AG012_hypothetical.pr... 20.0 1.5
Microvirus_gi|9626381|ref|NP_040711.1|_capsid_protein_[Enteroba... 19.2 3.3
Alpavirinae_Human_feces_A_047_Microviridae_AG0311_putative.VP1 18.9 4.6
Alpavirinae_Human_feces_B_020_Microviridae_AG0351_putative.VP1 18.5 5.8
Alpavirinae_Human_feces_B_021_Microviridae_AG0374_hypothetical.... 18.1 6.6
Alpavirinae_Human_feces_A_047_Microviridae_AG0318_hypothetical.... 18.1 8.1
> Alpavirinae_Human_feces_C_029_Microviridae_AG0110_hypothetical.protein
Length=54
Score = 61.2 bits (147), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%), Gaps = 0/45 (0%)
Query 6 YELEEDVITKKYIFTKQERRLICEKTYDKDNEDLEKWNQKQLKLF 50
+E+ ED + K+Y ++ER+LICEKTYDKD EDL+KWN KQLKLF
Sbjct 10 FEIFEDTVIKEYNLNRKERKLICEKTYDKDLEDLKKWNHKQLKLF 54
> Alpavirinae_Human_feces_A_048_Microviridae_AG088_hypothetical.protein
Length=54
Score = 38.1 bits (87), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/45 (47%), Positives = 30/45 (67%), Gaps = 0/45 (0%)
Query 6 YELEEDVITKKYIFTKQERRLICEKTYDKDNEDLEKWNQKQLKLF 50
+E+ ED I K+Y ++ERRLI EKTYD+ + L +QLKL+
Sbjct 10 FEIFEDTIIKEYNLNRKERRLIIEKTYDEQKDLLRHVLNQQLKLW 54
> Alpavirinae_Human_feces_B_020_Microviridae_AG0354_hypothetical.protein
Length=80
Score = 32.3 bits (72), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 0/46 (0%)
Query 5 CYELEEDVITKKYIFTKQERRLICEKTYDKDNEDLEKWNQKQLKLF 50
+++ ED I K Y K ERRL+ E TYD + E + QL LF
Sbjct 29 GFQIWEDTIFKSYNIKKTERRLLVEITYDLEKSQKEYFENLQLNLF 74
> Alpavirinae_Human_feces_C_010_Microviridae_AG0197_hypothetical.protein.BACPLE
Length=382
Score = 20.4 bits (41), Expect = 1.1, Method: Composition-based stats.
Identities = 12/45 (27%), Positives = 22/45 (49%), Gaps = 2/45 (4%)
Query 1 MKKICYELEEDVITKKY--IFTKQERRLICEKTYDKDNEDLEKWN 43
MK +++E+++ K+ E L+C+KTY E + N
Sbjct 226 MKAQQSQIDENIVQLKFDRYLRSNEFELLCKKTYQDMKESNSRIN 270
> Alpavirinae_Human_gut_21_005_Microviridae_AG012_hypothetical.protein.BACPLE
Length=383
Score = 20.0 bits (40), Expect = 1.5, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 23/41 (56%), Gaps = 6/41 (15%)
Query 7 ELEEDVITKKY--IFTKQERRLICEKTYDKDNEDLEKWNQK 45
E++E ++ K+ +E L+C +TY +D+++ N +
Sbjct 233 EIDEKIVQMKFDRYLRSKEFELLCVRTY----QDIKESNSR 269
> Microvirus_gi|9626381|ref|NP_040711.1|_capsid_protein_[Enterobacteria_phage_phiX174_sensu_lato]
Length=427
Score = 19.2 bits (38), Expect = 3.3, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 14/26 (54%), Gaps = 2/26 (8%)
Query 22 QERRLICEKTYDK--DNEDLEKWNQK 45
QER LI YD+ + L +WN +
Sbjct 381 QERVLIRHHDYDQCFQSVQLLQWNSQ 406
> Alpavirinae_Human_feces_A_047_Microviridae_AG0311_putative.VP1
Length=637
Score = 18.9 bits (37), Expect = 4.6, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 10/21 (48%), Gaps = 0/21 (0%)
Query 27 ICEKTYDKDNEDLEKWNQKQL 47
I K Y K DL +W + L
Sbjct 267 ILHKMYKKGMVDLNQWELESL 287
> Alpavirinae_Human_feces_B_020_Microviridae_AG0351_putative.VP1
Length=651
Score = 18.5 bits (36), Expect = 5.8, Method: Composition-based stats.
Identities = 6/15 (40%), Positives = 10/15 (67%), Gaps = 0/15 (0%)
Query 30 KTYDKDNEDLEKWNQ 44
K D+ ED ++W+Q
Sbjct 123 KLQDQPGEDEQQWSQ 137
> Alpavirinae_Human_feces_B_021_Microviridae_AG0374_hypothetical.protein
Length=66
Score = 18.1 bits (35), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 4/25 (16%)
Query 21 KQERRLICE----KTYDKDNEDLEK 41
+E +L+C K Y K+NE EK
Sbjct 41 PEETKLVCVIESWKLYPKENEKTEK 65
> Alpavirinae_Human_feces_A_047_Microviridae_AG0318_hypothetical.protein
Length=66
Score = 18.1 bits (35), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 10/24 (42%), Positives = 14/24 (58%), Gaps = 4/24 (17%)
Query 22 QERRLICE----KTYDKDNEDLEK 41
+E +L+C K Y K+NE EK
Sbjct 42 EETKLVCVVESWKLYPKENEKTEK 65
Lambda K H a alpha
0.318 0.136 0.400 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3623832