bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-1_CDS_annotation_glimmer3.pl_2_1
Length=155
Score E
Sequences producing significant alignments: (Bits) Value
gi|490418711|ref|WP_004291034.1| hypothetical protein 62.8 8e-09
gi|494822881|ref|WP_007558289.1| hypothetical protein 61.2 2e-08
gi|496050831|ref|WP_008775338.1| predicted protein 59.7 8e-08
gi|639237431|ref|WP_024568108.1| hypothetical protein 55.8 1e-06
gi|575094344|emb|CDL65728.1| unnamed protein product 55.5 2e-06
gi|575094319|emb|CDL65706.1| unnamed protein product 50.8 7e-05
gi|575094301|emb|CDL65691.1| unnamed protein product 48.5 5e-04
gi|547226428|ref|WP_021963491.1| putative uncharacterized protein 44.7 0.009
gi|547920047|ref|WP_022322418.1| putative uncharacterized protein 42.7 0.035
gi|492501772|ref|WP_005867312.1| hypothetical protein 42.4 0.046
>gi|490418711|ref|WP_004291034.1| hypothetical protein [Bacteroides eggerthii]
gi|217986638|gb|EEC52972.1| hypothetical protein BACEGG_02723 [Bacteroides eggerthii DSM
20697]
Length=368
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/36 (69%), Positives = 30/36 (83%), Gaps = 0/36 (0%)
Query 49 RQFQLDMWNKTNEYNSASAQRSRLEEAGLNPYLMMN 84
+ +Q +MWNK NEYN SAQR+RLE AGLNPY+MMN
Sbjct 86 KAYQTEMWNKQNEYNDPSAQRARLEAAGLNPYMMMN 121
>gi|494822881|ref|WP_007558289.1| hypothetical protein [Bacteroides plebeius]
gi|198272097|gb|EDY96366.1| hypothetical protein BACPLE_00802 [Bacteroides plebeius DSM 17135]
Length=344
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/33 (76%), Positives = 29/33 (88%), Gaps = 0/33 (0%)
Query 52 QLDMWNKTNEYNSASAQRSRLEEAGLNPYLMMN 84
+ DMWN NEYNSAS+QR RLEEAGLNPY+MM+
Sbjct 69 EWDMWNAENEYNSASSQRKRLEEAGLNPYMMMD 101
>gi|496050831|ref|WP_008775338.1| predicted protein [Bacteroides sp. 2_2_4]
gi|229448895|gb|EEO54686.1| hypothetical protein BSCG_01611 [Bacteroides sp. 2_2_4]
Length=381
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/37 (73%), Positives = 30/37 (81%), Gaps = 0/37 (0%)
Query 48 ARQFQLDMWNKTNEYNSASAQRSRLEEAGLNPYLMMN 84
A+Q DM+N TNEYNSASAQR R E AGLNPY+MMN
Sbjct 78 AKQNAWDMFNATNEYNSASAQRERYEAAGLNPYVMMN 114
>gi|639237431|ref|WP_024568108.1| hypothetical protein [Elizabethkingia anophelis]
Length=287
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/82 (44%), Positives = 39/82 (48%), Gaps = 18/82 (22%)
Query 1 MGLLDFIPVVGDIASSIGNVVSTnkannanmavnrmnnefnaaeaeKARQFQLDMWNKTN 60
M LL IPVVG I N S K N R F LDMWN+ N
Sbjct 1 MSLLSAIPVVGGIIEGAMNNSSNKKIAREN------------------RAFALDMWNRNN 42
Query 61 EYNSASAQRSRLEEAGLNPYLM 82
EYN+ AQ RL+EAGLNP LM
Sbjct 43 EYNTPLAQMQRLKEAGLNPNLM 64
>gi|575094344|emb|CDL65728.1| unnamed protein product [uncultured bacterium]
Length=368
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 26/37 (70%), Gaps = 0/37 (0%)
Query 47 KARQFQLDMWNKTNEYNSASAQRSRLEEAGLNPYLMM 83
K R FQLDMWN+ NEYN Q RLEEAG+NP+ M
Sbjct 59 KQRDFQLDMWNRNNEYNKPDEQMKRLEEAGINPWQSM 95
>gi|575094319|emb|CDL65706.1| unnamed protein product [uncultured bacterium]
Length=396
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/35 (63%), Positives = 25/35 (71%), Gaps = 0/35 (0%)
Query 50 QFQLDMWNKTNEYNSASAQRSRLEEAGLNPYLMMN 84
+F MWN NEYN QR+RLE AGLNPYLMM+
Sbjct 72 KFNERMWNLQNEYNRPDMQRARLEAAGLNPYLMMD 106
>gi|575094301|emb|CDL65691.1| unnamed protein product [uncultured bacterium]
Length=437
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/36 (53%), Positives = 26/36 (72%), Gaps = 0/36 (0%)
Query 49 RQFQLDMWNKTNEYNSASAQRSRLEEAGLNPYLMMN 84
R F MW TN+YN+ AQ+ RLE+AG+NPY+ M+
Sbjct 63 RDFARQMWKDTNDYNTPIAQKQRLEQAGMNPYVNMD 98
>gi|547226428|ref|WP_021963491.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
gi|524103380|emb|CCY83991.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
Length=416
Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/22 (86%), Positives = 20/22 (91%), Gaps = 0/22 (0%)
Query 62 YNSASAQRSRLEEAGLNPYLMM 83
YNSA AQR+RLE AGLNPYLMM
Sbjct 91 YNSAKAQRARLEAAGLNPYLMM 112
>gi|547920047|ref|WP_022322418.1| putative uncharacterized protein [Parabacteroides merdae CAG:48]
gi|524592959|emb|CDD13571.1| putative uncharacterized protein [Parabacteroides merdae CAG:48]
Length=259
Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 2/105 (2%)
Query 47 KARQFQLDMWNKTNEYNSASAQRSRLEEAGLNPYLMMNggsagtaqssgsstpasasspl 106
KA ++MWN N+YNS +AQ SRL +AGLNP L+ G G + S +
Sbjct 17 KAYARSVEMWNMQNQYNSPTAQMSRLRQAGLNPNLVYGSGVTGNSAGSAPQYQPAKIQRA 76
Query 107 sMQRQDFSGLSNTLASALQISNQTKETNANVQTLQSQKSLYDAQA 151
+M + + G + L+ A + ++ A V+ +++Q L QA
Sbjct 77 TM--EPYRGWNLGLSDAASMYMAMRQNKAQVENMEAQNKLIKEQA 119
>gi|492501772|ref|WP_005867312.1| hypothetical protein [Parabacteroides distasonis]
gi|409230405|gb|EKN23269.1| hypothetical protein HMPREF1059_03254 [Parabacteroides distasonis
CL09T03C24]
Length=288
Score = 42.4 bits (98), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/36 (56%), Positives = 25/36 (69%), Gaps = 0/36 (0%)
Query 47 KARQFQLDMWNKTNEYNSASAQRSRLEEAGLNPYLM 82
KA Q L+MWN NEYNS + Q +R+ AGLNP L+
Sbjct 52 KAYQRSLNMWNLQNEYNSPTQQMARIRAAGLNPNLV 87
Lambda K H a alpha
0.312 0.124 0.331 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 435859188405