bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-1_CDS_annotation_glimmer3.pl_2_8

Length=262
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|547226428|ref|WP_021963491.1|  putative uncharacterized protein    50.1    8e-04
gi|336469459|gb|EGO57621.1|  hypothetical protein NEUTE1DRAFT_122010  38.5    4.9
gi|85109471|ref|XP_962933.1|  hypothetical protein NCU06217           38.5    5.1
gi|149246245|ref|XP_001527592.1|  conserved hypothetical protein      37.4    9.3


>gi|547226428|ref|WP_021963491.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
 gi|524103380|emb|CCY83991.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
Length=416

 Score = 50.1 bits (118),  Expect = 8e-04, Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 47/213 (22%)

Query  3    RQDFSGLSNTLASALQISNQTKETNANVQTLQSQKSLYDAQANSILSNVDWWKLGPEYK-  61
            R DFSG++  + + L I              Q+QK + DAQA S+      +K+  +YK 
Sbjct  152  RPDFSGVTGIIQTLLDI--------------QAQKGVRDAQAFSLGEQASGFKIENKYKA  197

Query  62   ----------------KWSQMT----GLARAGLQFQTD----KQNLRNMTWSGNLIQAQ-  96
                            K SQ +      AR    F +D    ++   N  ++G LI+AQ 
Sbjct  198  EKLLWDIYNSKADYNLKNSQESLNNMSFARLQAMFSSDVSKAQREAENAQFTGELIRAQT  257

Query  97   ---HIGALLDNKSKRIINNYLDEGQRLQLDLMAAQYYDAMASGHLKYQQAKSEITKRILM  153
                +  LL  K  +    Y D+    +L +M+AQ Y  +A+G     QA+  I   + +
Sbjct  258  ACQQLQGLLGAKELK----YYDQKVLQELAIMSAQQYSLVAAGKASEAQARQAIENALNL  313

Query  154  MAEAKGLQINNKAAEDTADGYIKALNAEYSASY  186
            + + +G++++N   + TA+  IK      + SY
Sbjct  314  VEQREGIKVDNYVKQKTANALIKTARNNCNTSY  346


>gi|336469459|gb|EGO57621.1| hypothetical protein NEUTE1DRAFT_122010 [Neurospora tetrasperma 
FGSC 2508]
 gi|350290896|gb|EGZ72110.1| RNA-binding domain-containing protein [Neurospora tetrasperma 
FGSC 2509]
Length=771

 Score = 38.5 bits (88),  Expect = 4.9, Method: Compositional matrix adjust.
 Identities = 24/56 (43%), Positives = 36/56 (64%), Gaps = 3/56 (5%)

Query  102  LDNKSKRIINNYLDEGQRLQLDLMAAQYYDAMASGHLKYQQAKSEITKRILMMAEA  157
            L+ K+K  +NNYL EG+RL+LD+  A++ DA  +G +  + A  E  KR   +AEA
Sbjct  100  LEAKAK--LNNYLLEGKRLKLDIAEARHRDAKKTGPVVSKVA-EEKQKRAEAVAEA  152


>gi|85109471|ref|XP_962933.1| hypothetical protein NCU06217 [Neurospora crassa OR74A]
 gi|28924577|gb|EAA33697.1| nucleolar protein 4 [Neurospora crassa OR74A]
Length=772

 Score = 38.5 bits (88),  Expect = 5.1, Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 35/56 (63%), Gaps = 3/56 (5%)

Query  102  LDNKSKRIINNYLDEGQRLQLDLMAAQYYDAMASGHLKYQQAKSEITKRILMMAEA  157
            L+ K+K  +NNYL EG+RL+LD+  A++ DA  +G +   +   E  KR   +AEA
Sbjct  100  LEAKAK--LNNYLLEGKRLKLDIAEARHRDAKKTGPV-VSKVAEEKQKRAEAVAEA  152


>gi|149246245|ref|XP_001527592.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL 
YB-4239]
 gi|146447546|gb|EDK41934.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL 
YB-4239]
Length=660

 Score = 37.4 bits (85),  Expect = 9.3, Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 8/128 (6%)

Query  95   AQHIGALLDNKSK-RIINNYLDEGQRLQLDLMAAQYYDAMASGHLKYQQAKSEITKRILM  153
            AQ I A LD  +K R++ N ++E    +L+ ++A++     +  LK +   +++++R+L 
Sbjct  474  AQRIEAQLDQVAKSRVVLNSINE----KLNTLSAKHDLGNTTRILKAKARHTQLSRRVLR  529

Query  154  MAEAKG-LQINNKAAEDTADGYIKALNAEYSASYDINSPFKYGEDSYVPASVLKSRMDAL  212
            +A     L++         +G  K  +   S   D +SP     D +   +VLK R + L
Sbjct  530  LATVLAILKLKGYPLLPEEEGIAKQFDLLSSKINDPSSPIGKLGDIFAKLTVLKERAEDL  589

Query  213  NSKWQFDK  220
            NS  QFD+
Sbjct  590  NS--QFDQ  595



Lambda      K        H        a         alpha
   0.313    0.127    0.364    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1223431011738