bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-21_CDS_annotation_glimmer3.pl_2_1
Length=107
Score E
Sequences producing significant alignments: (Bits) Value
gi|655126327|ref|WP_028573442.1| taurine ABC transporter permease 42.0 0.027
gi|548188961|ref|WP_022409828.1| uncharacterized protein 38.5 0.32
gi|667765371|ref|WP_031386338.1| taurine ABC transporter permease 38.1 0.49
gi|586668262|ref|XP_006833500.1| hypothetical protein AMTR_s0009... 36.6 1.9
gi|573500917|gb|ETT01370.1| glycosyltransferase, group 1 family ... 35.4 3.8
gi|521960570|ref|WP_020472175.1| hypothetical protein 35.0 6.0
gi|574015393|gb|ETU92172.1| hypothetical protein Q054_00360 35.0 6.3
gi|497938315|ref|WP_010252471.1| excinuclease ABC subunit A 34.7 8.3
gi|541180720|gb|ERG89317.1| lactoylglutathione lyase 34.3 8.4
>gi|655126327|ref|WP_028573442.1| taurine ABC transporter permease [Desulfonatronum lacustre]
Length=337
Score = 42.0 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 28/101 (28%), Positives = 48/101 (48%), Gaps = 7/101 (7%)
Query 11 INNPDLTYQAEPREVKLRKIISGESSSMEDGVFPTIYTEKKDGVLPEFDIRTDRFEIAID 70
I +P L Q E + LR ++ G + ++ED Y ++DG++ + D+ T R ++AI+
Sbjct 221 IVSPQLAAQPEAVKGFLRAVVRGWAETLEDPAAAIAYVRERDGLI-DVDLETRRLKLAIE 279
Query 71 AMDKINQSAASQIAKSSGE------TEAVKDFGTETKTDPE 105
+ +AA+ + E E V FG T PE
Sbjct 280 TSVATDYAAANGMGDVDDERLVKAIAEVVNAFGLSTTPAPE 320
>gi|548188961|ref|WP_022409828.1| uncharacterized protein [Ruminococcus sp. CAG:330]
gi|524706212|emb|CDE12308.1| uncharacterized protein BN611_00105 [Ruminococcus sp. CAG:330]
Length=326
Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 44/82 (54%), Gaps = 2/82 (2%)
Query 23 REVKLRKIISGESSSMEDGVFPTIYTEKKDGVLPEFDIRTDRFEIAIDAMDKINQSAASQ 82
+EV L+ + + ES S D F ++ EK + + PE I++ +++ I+ D I + A Q
Sbjct 145 KEVALKPVKAAESLSFNDYRFENVFAEKFNQLSPEEPIQS-LYDLDINPWD-IEEPACKQ 202
Query 83 IAKSSGETEAVKDFGTETKTDP 104
K+SG + F T++DP
Sbjct 203 FIKNSGWGHKIGGFPAFTQSDP 224
>gi|667765371|ref|WP_031386338.1| taurine ABC transporter permease [Desulfonatronum thiodismutans]
Length=333
Score = 38.1 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 27/101 (27%), Positives = 46/101 (46%), Gaps = 7/101 (7%)
Query 11 INNPDLTYQAEPREVKLRKIISGESSSMEDGVFPTIYTEKKDGVLPEFDIRTDRFEIAID 70
I +P L Q E + LR ++ G + ++ED Y ++DG++ + D+ T R ++AI+
Sbjct 217 IVSPQLAAQPEVVKGFLRAVVRGWAETLEDPAAAIAYVRQRDGLI-DVDLETRRLKLAIE 275
Query 71 AMDKINQSAASQIAKSSGE------TEAVKDFGTETKTDPE 105
+AA+ + E E V F T PE
Sbjct 276 TSVATEYAAANGMGDVDDERLAKAIAEVVNAFDLSTTPAPE 316
>gi|586668262|ref|XP_006833500.1| hypothetical protein AMTR_s00093p00015400 [Amborella trichopoda]
gi|548838227|gb|ERM98778.1| hypothetical protein AMTR_s00093p00015400 [Amborella trichopoda]
Length=589
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 2/53 (4%)
Query 55 LPEFDIRT--DRFEIAIDAMDKINQSAASQIAKSSGETEAVKDFGTETKTDPE 105
+ EFD + + FE+A +++ + +I + +GETE ++++G +TDPE
Sbjct 5 MAEFDCESVIEAFEVATKDAERVQRETLRRILEENGETEYLQEWGLRGRTDPE 57
>gi|573500917|gb|ETT01370.1| glycosyltransferase, group 1 family protein [Providencia alcalifaciens
PAL-3]
gi|577061970|gb|EUC99001.1| glycosyltransferase, group 1 family protein [Providencia alcalifaciens
PAL-1]
Length=360
Score = 35.4 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 3/77 (4%)
Query 24 EVKLRKIISGESSSMEDGVFPTIYTEKKDGVLPEFD--IRTDRFE-IAIDAMDKINQSAA 80
E K++KIIS +++ + P I+ + KD +L E++ I T R+E + + ++ ++
Sbjct 219 EAKIKKIISNIPNNISIKIHPPIFNQDKDNILSEYNIYIMTSRYEGLPVSVIEALSYGCI 278
Query 81 SQIAKSSGETEAVKDFG 97
+++ + ++ V+ +G
Sbjct 279 CLLSEGTNLSKLVEKYG 295
>gi|521960570|ref|WP_020472175.1| hypothetical protein [Zavarzinella formosa]
Length=2013
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 18/65 (28%), Positives = 32/65 (49%), Gaps = 0/65 (0%)
Query 18 YQAEPREVKLRKIISGESSSMEDGVFPTIYTEKKDGVLPEFDIRTDRFEIAIDAMDKINQ 77
Y+ P ++II G +++ DG F +T K D +PE D T F++ D D +
Sbjct 748 YRLPPNRGAAQEIIHGTATTEADGSFGITFTAKPDLTIPEKDEPTFHFKVHADVTDTTGE 807
Query 78 SAASQ 82
+ + +
Sbjct 808 TRSGE 812
>gi|574015393|gb|ETU92172.1| hypothetical protein Q054_00360 [Pseudomonas aeruginosa Z61]
Length=481
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query 29 KIISGESSSMEDGVFPTIYTEKKDGVLPEFDIRTDRFEIAIDAMD----KINQSAASQIA 84
+I+ + + +D V T +TE DG + E I TDRF I A + +NQ I+
Sbjct 311 RILVVKGDTYKDKVRKTEFTEDDDGNITEVRILTDRFIPIIRAWEMTPSSVNQGRVLTIS 370
Query 85 KSSGETEAVKDFGTETKTDP 104
S+ TE +D E P
Sbjct 371 SSAATTEEAEDPQPEPAPAP 390
>gi|497938315|ref|WP_010252471.1| excinuclease ABC subunit A [Myroides injenensis]
Length=945
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/71 (30%), Positives = 39/71 (55%), Gaps = 1/71 (1%)
Query 24 EVKLRKIISGESSSMEDGVFPTIYTEKKDGVLPEFDIRTDRFEIAI-DAMDKINQSAASQ 82
E+ L+KII E S+++G + TEKK + + +I ++++ ++ D + KI A
Sbjct 292 EINLKKIIPDEKLSIKNGGLAPLGTEKKSWIFKQLEIIAEKYKFSLNDPISKIPSEAMDI 351
Query 83 IAKSSGETEAV 93
I K E+ +V
Sbjct 352 ILKGGQESFSV 362
>gi|541180720|gb|ERG89317.1| lactoylglutathione lyase [halophilic archaeon J07HX5]
Length=204
Score = 34.3 bits (77), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/75 (31%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query 32 SGESSSMED-GVFPTIYTEKKDGVLPE-----FDIRTDRFEIAIDAMDKINQSAASQIAK 85
+G S ++ D GVF ++YT DG++ E FD +R + A +I ++A ++ AK
Sbjct 114 AGRSYNVFDRGVFLSLYTRDHDGLIIELTVDKFDFPDERRGEVLAAAQRIREAAGAEYAK 173
Query 86 SSGETEAVKDFGTET 100
+ +A+ D G E
Sbjct 174 TEHLEKALVDLGIEV 188
Lambda K H a alpha
0.309 0.128 0.344 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 428991919341