bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters





Query= Contig-23_CDS_annotation_glimmer3.pl_2_6

Length=70
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|639519240|ref|WP_024679502.1|  hypothetical protein                36.6    1.3
gi|556480986|ref|WP_023332566.1|  hypothetical protein                33.1    3.7
gi|637089086|ref|WP_024420011.1|  hypothetical protein                33.9    7.2
gi|491829196|ref|WP_005620988.1|  hypothetical protein                33.9    7.3
gi|639549182|ref|WP_024696908.1|  hypothetical protein                33.5    9.6
gi|639485937|ref|WP_024658111.1|  hypothetical protein                33.5    9.7


>gi|639519240|ref|WP_024679502.1| hypothetical protein [Pseudomonas syringae]
Length=1032

 Score = 36.6 bits (83),  Expect = 1.3, Method: Composition-based stats.
 Identities = 24/59 (41%), Positives = 31/59 (53%), Gaps = 6/59 (10%)

Query  10   ELAYSPFFVRKRVGKRFTVIFRF--RTYEQASDCLRF-LLENYPGIYFDIK---DVSFS  62
            E A+SP F+    G+ F        R Y  ASD LR+ L++ Y GIY D     DVSF+
Sbjct  815  EEAFSPSFLNGENGEAFNYFMHSDNRNYAAASDILRYRLIDEYGGIYLDCDDTIDVSFA  873


>gi|556480986|ref|WP_023332566.1| hypothetical protein [Enterobacter sp. MGH 25]
 gi|555175657|gb|ESN18264.1| hypothetical protein L371_04210 [Enterobacter sp. MGH 25]
 gi|578288927|gb|EUM48667.1| hypothetical protein L383_00640 [Enterobacter sp. MGH 37]
Length=97

 Score = 33.1 bits (74),  Expect = 3.7, Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 25/37 (68%), Gaps = 0/37 (0%)

Query  16  FFVRKRVGKRFTVIFRFRTYEQASDCLRFLLENYPGI  52
           F + +RVG  F ++  F++YE+A D  + ++++YP I
Sbjct  54  FAIYERVGNYFVLVDFFKSYEEACDDAKKIIDDYPDI  90


>gi|637089086|ref|WP_024420011.1| hypothetical protein [Pseudomonas avellanae]
Length=1032

 Score = 33.9 bits (76),  Expect = 7.2, Method: Composition-based stats.
 Identities = 23/59 (39%), Positives = 30/59 (51%), Gaps = 6/59 (10%)

Query  10   ELAYSPFFVRKRVGKRFTVIFRF--RTYEQASDCLRF-LLENYPGIYFDIK---DVSFS  62
            E A+ P F+    G+ F        R Y  ASD LR+ L++ Y GIY D     DVSF+
Sbjct  815  EEAFFPSFLNGENGEAFNYFMHSDNRNYAAASDVLRYRLIDEYGGIYLDCDDTIDVSFA  873


>gi|491829196|ref|WP_005620988.1| hypothetical protein [Pseudomonas avellanae]
 gi|407987417|gb|EKG30224.1| hypothetical protein Pav631_4574 [Pseudomonas avellanae BPIC 
631]
Length=1032

 Score = 33.9 bits (76),  Expect = 7.3, Method: Composition-based stats.
 Identities = 23/59 (39%), Positives = 30/59 (51%), Gaps = 6/59 (10%)

Query  10   ELAYSPFFVRKRVGKRFTVIFRF--RTYEQASDCLRF-LLENYPGIYFDIK---DVSFS  62
            E A+ P F+    G+ F        R Y  ASD LR+ L++ Y GIY D     DVSF+
Sbjct  815  EEAFFPSFLNGENGEAFNYFMHSDNRNYAAASDVLRYRLIDEYGGIYLDCDDTIDVSFA  873


>gi|639549182|ref|WP_024696908.1| hypothetical protein [Pseudomonas syringae]
Length=1032

 Score = 33.5 bits (75),  Expect = 9.6, Method: Composition-based stats.
 Identities = 23/59 (39%), Positives = 30/59 (51%), Gaps = 6/59 (10%)

Query  10   ELAYSPFFVRKRVGKRFTVIFRF--RTYEQASDCLRF-LLENYPGIYFDIK---DVSFS  62
            E A+ P F+    G+ F        R Y  ASD LR+ L++ Y GIY D     DVSF+
Sbjct  815  EEAFFPSFLNGENGEAFNYFMHSDNRNYAAASDILRYRLIDEYGGIYLDCDDTIDVSFA  873


>gi|639485937|ref|WP_024658111.1| hypothetical protein [Pseudomonas syringae]
Length=1032

 Score = 33.5 bits (75),  Expect = 9.7, Method: Composition-based stats.
 Identities = 23/59 (39%), Positives = 30/59 (51%), Gaps = 6/59 (10%)

Query  10   ELAYSPFFVRKRVGKRFTVIFRF--RTYEQASDCLRF-LLENYPGIYFDIK---DVSFS  62
            E A+ P F+    G+ F        R Y  ASD LR+ L++ Y GIY D     DVSF+
Sbjct  815  EEAFFPSFLNGENGEAFNYFMHSDNRNYAAASDILRYRLIDEYGGIYLDCDDTIDVSFA  873



Lambda      K        H        a         alpha
   0.334    0.147    0.453    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 434135247084