bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           49,011,213 sequences; 17,563,301,199 total letters



Query= Contig-34_CDS_annotation_glimmer3.pl_2_1

Length=111
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|570733745|gb|AHF04908.1|  cobalamin-binding protein                38.1    0.56
gi|557817791|ref|WP_023447491.1|  hypothetical protein                36.6    1.8
gi|522192469|ref|WP_020699936.1|  hypothetical protein                36.2    2.5
gi|496410962|ref|WP_009119826.1|  hypothetical protein                34.7    8.3


>gi|570733745|gb|AHF04908.1| cobalamin-binding protein [Marichromatium purpuratum 984]
Length=530

 Score = 38.1 bits (87),  Expect = 0.56, Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 37/65 (57%), Gaps = 3/65 (5%)

Query  11   IKTDYEFQNG-ERIETKVSRITENNEPITDGAPIIYTSREDGVLPAYNIRTDR-WEVAQA  68
            +  ++  Q+G ERI+    R TE+NE +  GA +++  R+  + P Y++ TD  WE    
Sbjct  327  VYVEFGIQSGSERIKRLYDR-TESNERVVAGAELLHRHRDRLLPPDYHVITDNPWETEAD  385

Query  69   AMDAV  73
            AMD V
Sbjct  386  AMDTV  390


>gi|557817791|ref|WP_023447491.1| hypothetical protein [Asticcacaulis benevestitus]
 gi|557339739|gb|ESQ79469.1| hypothetical protein ABENE_22670 [Asticcacaulis benevestitus 
DSM 16100 = ATCC BAA-896]
Length=1077

 Score = 36.6 bits (83),  Expect = 1.8, Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 5/66 (8%)

Query  30   ITENNEPITDGAPIIYT--SREDGVLPAYNIRTD---RWEVAQAAMDAVNQANLAKSKNY  84
            ++ N+    +GA II T  ++   VLP++N++ D    W V  AA  A+++ +L   KNY
Sbjct  731  LSANDLAFNNGAYIIRTAKTKHTNVLPSFNLKIDLNDEWLVRFAASKAMSRPDLGYLKNY  790

Query  85   GKIEQQ  90
              I +Q
Sbjct  791  SAITRQ  796


>gi|522192469|ref|WP_020699936.1| hypothetical protein [Pleurocapsa sp. PCC 7319]
Length=1004

 Score = 36.2 bits (82),  Expect = 2.5, Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 4/86 (5%)

Query  26   KVSRITENNEPITD--GAPIIYTSREDGVLPAYNIRTDRWEVAQAAMDAVNQANLAKSKN  83
             +S +  N EP+TD  G PI  T+ EDG     N+  D + V Q      +  NLA+++ 
Sbjct  364  TLSLLDSNGEPVTDSEGNPITTTTNEDGNYLFENLTPDDYSVVQTQ--PADYNNLAENEG  421

Query  84   YGKIEQQEQNALESKEIGNTPSQQDS  109
                +Q + N + S  +  +P++ D+
Sbjct  422  GSDDDQPDDNVVNSIGVTVSPNETDT  447


>gi|496410962|ref|WP_009119826.1| hypothetical protein [Neisseria shayeganii]
 gi|348012736|gb|EGY51676.1| hypothetical protein HMPREF9371_2140 [Neisseria shayeganii 871]
Length=1120

 Score = 34.7 bits (78),  Expect = 8.3, Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 0/47 (0%)

Query  62   RWEVAQAAMDAVNQANLAKSKNYGKIEQQEQNALESKEIGNTPSQQD  108
            +WE AQAA+ AV Q      +  G++EQ+++NA E        ++QD
Sbjct  706  QWEAAQAALKAVQQQLAELGRRQGRLEQEQENAEERIRSLRAVAKQD  752



Lambda      K        H        a         alpha
   0.308    0.127    0.353    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 438125291904