bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
49,011,213 sequences; 17,563,301,199 total letters
Query= Contig-4_CDS_annotation_glimmer3.pl_2_1
Length=153
Score E
Sequences producing significant alignments: (Bits) Value
gi|490418710|ref|WP_004291033.1| hypothetical protein 60.8 4e-09
gi|496050830|ref|WP_008775337.1| hypothetical protein 59.7 1e-08
gi|547226429|ref|WP_021963492.1| putative uncharacterized protein 51.6 8e-06
gi|494822883|ref|WP_007558291.1| hypothetical protein 50.4 2e-05
gi|575094359|emb|CDL65741.1| unnamed protein product 45.4 0.001
gi|586730661|gb|EAS02605.2| DHHC zinc finger protein 37.0 3.5
gi|118379368|ref|XP_001022850.1| DHHC zinc finger domain contain... 37.0 4.5
gi|547332801|ref|WP_022063436.1| lipoprotein putative 36.6 5.4
>gi|490418710|ref|WP_004291033.1| hypothetical protein [Bacteroides eggerthii]
gi|217986637|gb|EEC52971.1| hypothetical protein BACEGG_02722 [Bacteroides eggerthii DSM
20697]
Length=155
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 6/89 (7%)
Query 35 VNKDG--SIVISNDISLIFNQQRLENKLTASELREYIQRYT---PNKSVYTAQLDDDTLL 89
+ DG SI I++DI ++FNQQRL +KLT S+L EY + P S ++ D+ L
Sbjct 44 IECDGKKSIRITSDIYMLFNQQRL-DKLTRSQLVEYFDNLSVSEPKMSDLRKKMTDEQLC 102
Query 90 NTLKSRHIQSLSEMRSWAEYCMENYDSLI 118
+ +KSR IQ+ SE+ +W++Y M + D++I
Sbjct 103 SFVKSRFIQTPSELMAWSQYLMSSQDAMI 131
>gi|496050830|ref|WP_008775337.1| hypothetical protein [Bacteroides sp. 2_2_4]
gi|229448894|gb|EEO54685.1| hypothetical protein BSCG_01610 [Bacteroides sp. 2_2_4]
Length=154
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 59/99 (60%), Gaps = 5/99 (5%)
Query 23 PVQDKLMQLSTVVNKDGSIVISNDISLIFNQQRLENKLTASELREYIQRYT---PNKSVY 79
PV L Q V+ D SI +S+DI ++FNQQRL +KL+ + L EY + P +
Sbjct 34 PVDQFLFQ-EVSVDGDTSIRLSSDIYMLFNQQRL-DKLSQTSLLEYFNNISVTEPRFNEL 91
Query 80 TAQLDDDTLLNTLKSRHIQSLSEMRSWAEYCMENYDSLI 118
++L D+ L++ +KSR IQS SE+ +W+ Y M + D I
Sbjct 92 RSKLGDEQLISFVKSRFIQSKSELMAWSNYLMNSTDEQI 130
>gi|547226429|ref|WP_021963492.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
gi|524103381|emb|CCY83992.1| putative uncharacterized protein [Prevotella sp. CAG:1185]
Length=152
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/107 (32%), Positives = 62/107 (58%), Gaps = 9/107 (8%)
Query 23 PVQDKLMQLSTVVN---KDGSIVISNDISLIFNQQRLENKLTASELREYIQRYTPNKSVY 79
P+++ + + T N K +I +DI ++FNQ RL++ + +++++ TP +S
Sbjct 29 PIREFMTEKVTYFNGSDKKTAIAYVDDIYMLFNQNRLDS-VGRDTIQKWLDGLTP-RSDS 86
Query 80 TAQL----DDDTLLNTLKSRHIQSLSEMRSWAEYCMENYDSLIKDVE 122
A+L D+ L+ KSR+IQS SE+ +W+EY NY S++ +E
Sbjct 87 LAKLRENVTDEQLMEICKSRYIQSSSELLAWSEYLNANYASILSSIE 133
>gi|494822883|ref|WP_007558291.1| hypothetical protein [Bacteroides plebeius]
gi|198272098|gb|EDY96367.1| hypothetical protein BACPLE_00803 [Bacteroides plebeius DSM 17135]
Length=140
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 4/109 (4%)
Query 18 LHTKVPVQDKLMQ-LSTVVNKDGSIVISNDISLIFNQQRLENKLTASELREYIQ--RYTP 74
L PV+D + + T + ++ NDI +I NQ+RL++ +T ++ +Y+ R
Sbjct 7 LRVPSPVEDFYREEVQTPLGSTPAVTYRNDIYMILNQRRLDS-MTLAQFSDYLDHDRSAS 65
Query 75 NKSVYTAQLDDDTLLNTLKSRHIQSLSEMRSWAEYCMENYDSLIKDVEE 123
S ++ D+ L +KSR+IQ SE+R+WA Y Y I+ +EE
Sbjct 66 QLSQMREKMSDEQLHQFVKSRYIQHPSELRAWASYLDIEYSKEIQKLEE 114
>gi|575094359|emb|CDL65741.1| unnamed protein product [uncultured bacterium]
Length=156
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (52%), Gaps = 4/110 (4%)
Query 15 FDILHTKVPVQDKLMQLSTVVNKDGSIVISNDISLIFNQQRLENKLTASELREYIQRYTP 74
I K PV++ +Q S+ I +D+ ++FNQQRL+ ++T + L +++ R +
Sbjct 23 LSIFREKSPVENFYIQKHKSKYGCESVSIVDDVYMLFNQQRLD-RMTNAALADWLSRTSR 81
Query 75 NKSVYTA---QLDDDTLLNTLKSRHIQSLSEMRSWAEYCMENYDSLIKDV 121
S + ++ D L +KSR+IQS SE+ +++ Y Y L V
Sbjct 82 TDSQLASLRSRMSDVQLGAFIKSRYIQSRSELLAYSSYLESQYPELAPAV 131
>gi|586730661|gb|EAS02605.2| DHHC zinc finger protein [Tetrahymena thermophila SB210]
Length=542
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/67 (27%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query 48 SLIFNQQRLENKLTASELREYIQRYTPNKSVYTAQLDDDTLLNTLKSRHIQSLSE-MRSW 106
SLIF ++ ++KL +L+EYI++Y PN + A+L + K + +++ +
Sbjct 319 SLIFEKEYYDSKLLMKQLKEYIEQYHPNNPLLQAELQYQEIHFLYKKKKFNEINDKINQA 378
Query 107 AEYCMEN 113
+++C++N
Sbjct 379 SQFCLQN 385
>gi|118379368|ref|XP_001022850.1| DHHC zinc finger domain containing protein [Tetrahymena thermophila]
Length=1007
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/67 (27%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query 48 SLIFNQQRLENKLTASELREYIQRYTPNKSVYTAQLDDDTLLNTLKSRHIQSLSE-MRSW 106
SLIF ++ ++KL +L+EYI++Y PN + A+L + K + +++ +
Sbjct 784 SLIFEKEYYDSKLLMKQLKEYIEQYHPNNPLLQAELQYQEIHFLYKKKKFNEINDKINQA 843
Query 107 AEYCMEN 113
+++C++N
Sbjct 844 SQFCLQN 850
>gi|547332801|ref|WP_022063436.1| lipoprotein putative [Alistipes sp. CAG:157]
gi|524232353|emb|CCZ99560.1| lipoprotein putative [Alistipes sp. CAG:157]
Length=603
Score = 36.6 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 20/67 (30%), Positives = 36/67 (54%), Gaps = 2/67 (3%)
Query 11 FNGSFDILHTKVPVQDKLMQLSTVVNK--DGSIVISNDISLIFNQQRLENKLTASELREY 68
F+G +D+L V L TVV + DG+I + + +S+ F ++ E + + + + E
Sbjct 81 FDGDYDVLLKHVADDTVLADDETVVTRSADGTIAVKDLLSVYFPEEGTETRSSGTNIIEE 140
Query 69 IQRYTPN 75
+QR PN
Sbjct 141 LQRLYPN 147
Lambda K H a alpha
0.314 0.129 0.352 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 439486018167