bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-10_CDS_annotation_glimmer3.pl_2_7 Length=377 Score E Sequences producing significant alignments: (Bits) Value 586220.HMPREF0555_0349 38.1 3.3 > 586220.HMPREF0555_0349 Length=586 Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 43/77 (56%), Gaps = 2/77 (3%) Query 150 QASKANEEAKKISGVDTQEALKRIEGIASQIELNLKEGQYKEALTDLTKAEKEATEALTS 209 QA+ EA+ I+ + T+ L+R++G+ E +K+ + L DL K ++E EA+ Sbjct 103 QANLVLFEARGINFIKTRNELERLQGMVDDTETTIKD--VRAGLLDLKKTDEEHREAIND 160 Query 210 LREMQEGLTSAQISEAF 226 L++ EGL ++E F Sbjct 161 LKKKYEGLRKRLLAENF 177 Lambda K H a alpha 0.308 0.124 0.337 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 711574824160