bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-12_CDS_annotation_glimmer3.pl_2_2

Length=164
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  484018.BACPLE_00803                                                 52.4    1e-06


> 484018.BACPLE_00803
Length=140

 Score = 52.4 bits (124),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 43/72 (60%), Gaps = 1/72 (1%)

Query  51   VRYTSDVCLILHTKDLASRAGLAVASKFGQSKQPISQIQQIMDTMSDEDLLATIRSRYIQ  110
            V Y +D+ +IL+ + L S   LA  S +    +  SQ+ Q+ + MSDE L   ++SRYIQ
Sbjct  31   VTYRNDIYMILNQRRLDS-MTLAQFSDYLDHDRSASQLSQMREKMSDEQLHQFVKSRYIQ  89

Query  111  SPSEIIAWSKEL  122
             PSE+ AW+  L
Sbjct  90   HPSELRAWASYL  101



Lambda      K        H        a         alpha
   0.309    0.123    0.327    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 126873085560