bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-12_CDS_annotation_glimmer3.pl_2_3

Length=613
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  483216.BACEGG_02721                                                   422   5e-137


> 483216.BACEGG_02721
Length=578

 Score =   422 bits (1085),  Expect = 5e-137, Method: Compositional matrix adjust.
 Identities = 252/622 (41%), Positives = 345/622 (55%), Gaps = 53/622 (9%)

Query  1    MASYTGMSNLQNHPHRSGFDIGRKNAFTAKVGELLPVYWDISMPGDKYRFNIEYFTRTQP  60
            MA+   + +++N P R+GFD+  K  FTAK GELLPV     +PGD ++ N++ FTRTQP
Sbjct  1    MANIMSLKSIRNKPSRNGFDLSFKKNFTAKAGELLPVMVKEVLPGDTFKINLKAFTRTQP  60

Query  61   VETSAYTRLREYFDFYAVPLRLLWKSAPSVLTQMQDVNKIQALSL--TQNLSLGTFLPSI  118
            V T+A+ R+REY+DF+ VP  LLW  A +VLTQM D N   A+S+  T+N  L   +P +
Sbjct  61   VNTAAFARIREYYDFFFVPYDLLWNKANTVLTQMYD-NPQHAVSIDPTRNFVLSGEMPYM  119

Query  119  PLSVLSDAMYLLNGRSWTPGNSSSLKNMFGFDRSDLCYKLLSYLGYGNLISSESTGRWWS  178
                ++     +N  S     +    N FG++RS    KLL YLGYGN   S  T  W  
Sbjct  120  TSEAIAS---YINALSTASALADYKSNYFGYNRSKSSVKLLEYLGYGNY-ESFLTDDW--  173

Query  179  TSVSSKNDASYTQRYIQNNYVNLFPLLAYQKIYQDFFRWSQWEASNPSSYNVDYFTGVSP  238
                       T   + N   N+F LLAYQKIY DF+R SQWE  +PS++NVDY  G S 
Sbjct  174  ----------NTAPLMANLNHNIFGLLAYQKIYSDFYRDSQWERVSPSTFNVDYLDGSSM  223

Query  239  SLISSLLSVSPDYWKSGTMFDLKYCNWNKDMLMGVLPNSQFGDVAVLDIPDSGDSNVVLG  298
            +L ++    S +++++   FDL+YCNW KD+  GVLP+ Q+G+ AV  I       + L 
Sbjct  224  NLDNAY---STEFYQNYNFFDLRYCNWQKDLFHGVLPHQQYGETAVASITPDVTGKLTL-  279

Query  299  TDSHKSSVGIASAITSKTAPFPLFALDASPENPIPINSKLRLDLSSLKSQFTVLALRQAE  358
              S+ S+VG +    S TA   L A D   +                    ++L LRQAE
Sbjct  280  --SNFSTVGTSPTTASGTATKNLPAFDTVGD-------------------LSILVLRQAE  318

Query  359  ALQRWKEISQSGDSDYREQIRKHFGVKLPQALSNMCTYIGGVSRNLDISEVVNNNLATEG  418
             LQ+WKEI+QSG+ DY++Q+ KH+GV +    S +CTY+GGVS ++DI+EV+N N+ T  
Sbjct  319  FLQKWKEITQSGNKDYKDQLEKHWGVSVGDGFSELCTYLGGVSSSIDINEVINTNI-TGS  377

Query  419  DTAVIAGKGVGAGNGSFEYTTT-EHCVVMCIYHAVPLLDYTLTGQDGQLLVTDAESLPIP  477
              A IAGKGVG  NG   + +   + ++MCIYH +PLLDYT    D   L  ++    IP
Sbjct  378  AAADIAGKGVGVANGEINFNSNGRYGLIMCIYHCLPLLDYTTDMLDPAFLKVNSTDYAIP  437

Query  478  EFDNIGMEVLPMTQVFNSPKASIVNL--FNAGYNPRYFNWKTKLDVINGAFTTTLKSWVS  535
            EFD +GM+ +P+ Q+ N P  S  N      GY PRY ++KT +D   G F  TL SWV 
Sbjct  438  EFDRVGMQSMPLVQLMN-PLRSFANASGLVLGYVPRYIDYKTSVDQSVGGFKRTLNSWVI  496

Query  536  PVTESLLSGWFCFGYNKDDAAPDTKV----IMNYKFFKVNPSVLDPIFGVNADSTWDTDQ  591
                  +        +     P   V     MN+ FFKVNP  LDPIF V A    +TDQ
Sbjct  497  SYGNISVLKQVTLPNDAPPIEPSEPVPSVAPMNFTFFKVNPDCLDPIFAVQAGDDTNTDQ  556

Query  592  LLVNSYIGCYVVRNLSRDGVPY  613
             L +S+     VRNL  DG+PY
Sbjct  557  FLCSSFFDIKAVRNLDTDGLPY  578



Lambda      K        H        a         alpha
   0.318    0.134    0.408    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1373339547970