bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-13_CDS_annotation_glimmer3.pl_2_3

Length=579
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  469590.BSCG_01609                                                     296   5e-89


> 469590.BSCG_01609
Length=580

 Score =   296 bits (758),  Expect = 5e-89, Method: Compositional matrix adjust.
 Identities = 213/612 (35%), Positives = 306/612 (50%), Gaps = 65/612 (11%)

Query  1    MSDFNPLNRARISTHRSSFDLSSKKLFTAKVGEILPCYWQIAIPGNKYRISSDWFTRTVP  60
            M++   L   R  T R+ FDLSSK+ FTAK GE+LP      +PG+K+ I    FTRT P
Sbjct  1    MANIMSLKSLRNKTSRNGFDLSSKRNFTAKPGELLPVKCWEVLPGDKWSIDLKSFTRTQP  60

Query  61   VNTAAYTRIKEYYDFYAVPLRLISRALPQAFTQMTDYITSAAS--STANSSTLTSVPFVS  118
            +NTAA+ R++EYYDFY VP  L+        TQM D    A S   +AN +    +P V+
Sbjct  61   LNTAAFARMREYYDFYFVPYNLLWNKANTVLTQMYDNPQHATSYIPSANQALAGVMPNVT  120

Query  119  QTLFNAFFQTANAGDQPNT----RDDAGLPIVYGSCKLLDMLGYGSMIASNNPSKAAITK  174
                  +     A D   T    ++  G     G+ KLL+ LGYG+            TK
Sbjct  121  CKGIADYLNLV-APDVTTTNSYEKNYFGYSRSLGTAKLLEYLGYGNFYTYATSKNNTWTK  179

Query  175  KYLGVDSLNDADNPLVYQTSQTVNALPFLAYQKIYYDFFSNSQWEKHKAYAYNVDYWSGA  234
                        +PL   ++  +N    LAYQKIY D   +SQWEK     +NVDY SG 
Sbjct  180  ------------SPL--SSNLQLNIYGVLAYQKIYADHIRDSQWEKVSPSCFNVDYLSGT  225

Query  235  GNIGLVTD-------------MVQLRYANYPKDYFMGMLPSSQYGSVAVLPSISSSSDSR  281
             +  +  D             M  LRY N+ KD F G+LP  QYG  A +    S+  S 
Sbjct  226  VDSAMTIDSMITGQGFAPFYNMFDLRYCNWQKDLFHGVLPRQQYGDTAAVNVNLSNVLSA  285

Query  282  SLLYYEPSSSATAALQSAGGSSSSVRLSQTVSSSQGIRLNSDLSALSIRATEYLQRWKEI  341
              +   P          +  SS+ V L QTV+ S         + L++R  E+LQ+WKEI
Sbjct  286  QYMVQTPDGDPVGG---SPFSSTGVNL-QTVNGS------GTFTVLALRQAEFLQKWKEI  335

Query  342  VQFSSKDYSDQMAAQFGIKAPEYMGNHSHYIGGWSSVININEVVNTNLDADSSQASIAGK  401
             Q  +KDY DQ+   + +   E     S Y+GG ++ ++INEVVN N+   S+ A IAGK
Sbjct  336  TQSGNKDYKDQIEKHWNVSVGEAYSEMSLYLGGTTASLDINEVVNNNITG-SNAADIAGK  394

Query  402  GISSNSGHTLTYDCGAEHQIIMCVYHAVPMLDWNLTGQAPQLTVTAISDFPQPAFDQLGM  461
            G+   +G  +++D G  + +IMC+YH++P+LD+      P  T    +DF  P FD++GM
Sbjct  395  GVVVGNGR-ISFDAGERYGLIMCIYHSLPLLDYTTDLVNPAFTKINSTDFAIPEFDRVGM  453

Query  462  QSVPSLNLQN--NPGRNV-SGALGYNLRYWQWKSNIDTVHAGFRAGAAYQSWVAPLDGWN  518
            +SVP ++L N      NV S  LGY  RY  +K+++D+    F+     +SWV   D  +
Sbjct  454  ESVPLVSLMNPLQSSYNVGSSILGYAPRYISYKTDVDSSVGAFK--TTLKSWVMSYDNQS  511

Query  519  VL----------TSSGAW-SYQSMKVRPQQLNSIFVPQVDSANCSVAFDQLLCNVNFQVY  567
            V+           S G   +Y + KV P  ++ +F     +A+ S+  DQ LC+  F V 
Sbjct  512  VINQLNYQDDPNNSPGTLVNYTNFKVNPNCVDPLFAV---AASNSIDTDQFLCSSFFDVK  568

Query  568  AVQNLDRNGLPY  579
             V+NLD +GLPY
Sbjct  569  VVRNLDTDGLPY  580



Lambda      K        H        a         alpha
   0.316    0.129    0.387    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1282750120960