bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.30+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggnogv4.proteins.all.fa 14,875,530 sequences; 5,112,597,290 total letters Query= Contig-15_CDS_annotation_glimmer3.pl_2_5 Length=489 Score E Sequences producing significant alignments: (Bits) Value 483216.BACEGG_02720 101 2e-20 > 483216.BACEGG_02720 Length=422 Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/104 (49%), Positives = 65/104 (63%), Gaps = 1/104 (1%) Query 88 HLQDYYGYISRKDGQLFVKRLRKHIFKFAGKYEKVHIYLVSEYGPVHFRPHFHILLFTDS 147 HL Y Y+ + D QLF KR R ++ K K EKV + + EYGPVHFRPH+HILLF S Sbjct 36 HLFGYLPYLRKFDLQLFFKRFRYYVAKRFPK-EKVRYFAIGEYGPVHFRPHYHILLFLQS 94 Query 148 DRVAKNIGRIVNSSWKFGRCDWSASRGDAESYVAGYVNSFSRLP 191 D + ++V+ +W FGR D S+G SYVAGYVNS +P Sbjct 95 DEALQVCSKVVSEAWPFGRVDCQLSKGKCSSYVAGYVNSSVLVP 138 Lambda K H a alpha 0.322 0.137 0.418 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 1024829734650