bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-20_CDS_annotation_glimmer3.pl_2_2

Length=370
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  679190.HMPREF0650_1081                                              57.8    1e-06


> 679190.HMPREF0650_1081
Length=362

 Score = 57.8 bits (138),  Expect = 1e-06, Method: Compositional matrix adjust.
 Identities = 52/187 (28%), Positives = 80/187 (43%), Gaps = 5/187 (3%)

Query  2    PIQDLLGVGTSLLGGVFSGIGAKKRQKAAIKAQREENEKARNWQQKMAEWQVGIERENLA  61
            PI   L        G+    GA +RQK AIK Q    E  +  Q ++ E  +  +RE   
Sbjct  3    PIIPFLEPAAGAFNGLLGAFGASRRQKRAIKNQWAMFEAQKQHQNEVNERAMAFQREMNQ  62

Query  62   DERAYNDPSAVMKRLKDAGLNPDLMYGSGASGLVDSNVADSASVGNVPPADVAGPIMGTP  121
                +N+ S V +R++DAG NP L      S  V+ +   + +V    P D+  P     
Sbjct  63   RNEDWNNESNVRQRVEDAGYNPYLYQNGAMSSNVNQSTPLAQNVAPTSPVDLPDPFSEFA  122

Query  122  -TMMESLFQGAAYAKTVAETKNIKADTSKKEGEVTSLNIDNFVKAASSDNAIKMSGLEVQ  180
             + ++S+   A    T   T+NI AD+++ E  +      +  K A  D    +   E Q
Sbjct  123  NSAIDSVKGIADILLTKQNTRNIAADSARAEYMLGRQKYKDSQKYAGYD----LPTAEAQ  178

Query  181  LTKAQAE  187
            LT  Q E
Sbjct  179  LTHTQLE  185



Lambda      K        H        a         alpha
   0.311    0.125    0.340    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 690468791240