bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-23_CDS_annotation_glimmer3.pl_2_5

Length=334
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  272557.APE_1878                                                     39.3    0.76


> 272557.APE_1878
Length=305

 Score = 39.3 bits (90),  Expect = 0.76, Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 6/64 (9%)

Query  245  ISTAWTYACVFGSSLALGFLREVAQRVLRPSSFSRIVKGGFSRLVKLREFLSKVKFSQRF  304
            I+ AW +A  +G     GFL  V   VL   + SRI  GGF+R  + RE L   KF+   
Sbjct  231  IAVAWAFALYYGY----GFLTAVITTVLAALAISRI--GGFARTGERREALKLFKFASPI  284

Query  305  IAVV  308
            IAVV
Sbjct  285  IAVV  288



Lambda      K        H        a         alpha
   0.327    0.141    0.450    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 587824479460