bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-30_CDS_annotation_glimmer3.pl_2_2

Length=555
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  585502.HMPREF0645_1835                                              81.6    1e-13


> 585502.HMPREF0645_1835
Length=553

 Score = 81.6 bits (200),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 124/527 (24%), Positives = 204/527 (39%), Gaps = 132/527 (25%)

Query  11   LNPTRIDMSRSTFDRNSSVKTSFNVGDIVPFYVDEVLPGDTFDIDTSKVIRMPSLLTPIM  70
            +  TR + +R+ FD +     + + G ++P    +++P D  +I+    +R   + T   
Sbjct  8    IKATRPNRNRNAFDLSQRHLFTAHAGMLLPVLNLDLIPHDHVEINAQDFMRTLPMNTAAF  67

Query  71   DNLYLDTYYFFVPNRIVWQHWKELM-GEN------NESAWIPTTEYEVPQITAPSGGWSI  123
             ++     +FFVP   +W  + + + G N      N+S    T+  +VP     S   S+
Sbjct  68   ASMRGVYEFFFVPYHQLWAQFDQFITGMNDFHSSANKSIQGGTSPLQVPYFNVDSVFNSL  127

Query  124  GT----------------------IADYMGV-----------PTGVSGLS----VNALPF  146
             T                      + D +G            P  VSGL      N   F
Sbjct  128  NTGKESGSGSTDDLQYKFKYGAFRLLDLLGYGRKFDSFGTAYPDNVSGLKNNLDYNCSVF  187

Query  147  R--AYALICNEWFRDENL----CDPLNIPLTDATVAGVNTGTFVTDVAKGGLPYKAAKYR  200
            R  AY  I  +++R+ N      D  N    D    G+     V D+ K  L Y+ A+  
Sbjct  188  RILAYNKIYQDYYRNSNYENFDTDSFNF---DKFKGGLVDAKVVADLFK--LRYRNAQ-T  241

Query  201  DYFTSCLPAPQKSEDVTIPVSSGANYPVLSLSDIVPTPGTVPVKWNDANNVVSDAQWLLG  260
            DYFT+                       L  S +     +    + D +N+       + 
Sbjct  242  DYFTN-----------------------LRQSQLF----SFTTAFEDVDNIN------IA  268

Query  261  GKNYNGTITSNDISLTKTNTGPTYSAVTPINLWAVNDGSVSSATINQLRLAFQVQKLYER  320
             ++Y  +  SN                T +N     D S    +++ LR AF V KL   
Sbjct  269  PRDYVKSDGSN---------------FTRVNFGVDTDSSEGDFSVSSLRAAFAVDKLLSV  313

Query  321  DARGGTRYIEVLKSHFGVTSPDARLQRPEYLGGNRIPIVISEINQTSGTSANS-------  373
              R G  + + +++H+GV  PD+R  R  YLGG    + +S++ QTSGT+A         
Sbjct  314  TMRAGKTFQDQMRAHYGVEIPDSRDGRVNYLGGFDSDMQVSDVTQTSGTTATEYKPEAGY  373

Query  374  ----TPQGNPSGQSRTTDVHSDFKKSFVEHGFIIGVMVA----RYDHTYQQGLERFWSRK  425
                  +G  SG+ R   +  D K    EHG ++ +       +YD T    L+    + 
Sbjct  374  LGRVAGKGTGSGRGR---IVFDAK----EHGVLMCIYSLVPQIQYDCTR---LDPMVDKL  423

Query  426  GRLDYYWPVFANIGEQAVLNKEIYAQGNGTD--DEVFGYQEAWADYR  470
             R DY+ P F N+G Q  LN    +    TD  + V GYQ  +++Y+
Sbjct  424  DRFDYFTPEFENLGMQP-LNSSYISSFCTTDPKNPVLGYQPRYSEYK  469



Lambda      K        H        a         alpha
   0.316    0.133    0.410    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1211814630400