bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-31_CDS_annotation_glimmer3.pl_2_1

Length=534
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  483216.BACEGG_02721                                                   363   3e-115


> 483216.BACEGG_02721
Length=578

 Score =   363 bits (932),  Expect = 3e-115, Method: Compositional matrix adjust.
 Identities = 205/525 (39%), Positives = 306/525 (58%), Gaps = 46/525 (9%)

Query  2    SLFNLSSVKNHPRRSGFDLSSKVAFTAKVGELLPVKWTLTMPGDKFSLKEQHFTRTQPVN  61
            ++ +L S++N P R+GFDLS K  FTAK GELLPV     +PGD F +  + FTRTQPVN
Sbjct  3    NIMSLKSIRNKPSRNGFDLSFKKNFTAKAGELLPVMVKEVLPGDTFKINLKAFTRTQPVN  62

Query  62   TSAYTRVREYYDWFWCPLHLLWRNAPEVISQIQQNVQHASSFDGS--VLLGSNMPCLSAD  119
            T+A+ R+REYYD+F+ P  LLW  A  V++Q+  N QHA S D +   +L   MP ++++
Sbjct  63   TAAFARIREYYDFFFVPYDLLWNKANTVLTQMYDNPQHAVSIDPTRNFVLSGEMPYMTSE  122

Query  120  QISQSLDQLKS-------KQNYFGFDRADLAYKLLQYLRYGNVRTGVGSNGARNYGTSID  172
             I+  ++ L +       K NYFG++R+  + KLL+YL YGN  + +      ++ T+  
Sbjct  123  AIASYINALSTASALADYKSNYFGYNRSKSSVKLLEYLGYGNYESFL----TDDWNTAPL  178

Query  173  VKDGTYNQNRAYNHALSIFPILAYKKFCQDYFRLTQWQDSAPYLWNIDYYDGKGAVTILP  232
            + +  +N          IF +LAY+K   D++R +QW+  +P  +N+DY DG      + 
Sbjct  179  MANLNHN----------IFGLLAYQKIYSDFYRDSQWERVSPSTFNVDYLDGSS----MN  224

Query  233  TSLTSSAAYFEGDTFFDLEYCNWNKDMFFGILPDAQFGDTSVVDISYGVTGAPVVTKQNL  292
                 S  +++   FFDL YCNW KD+F G+LP  Q+G+T+V  I+  VTG   +T  N 
Sbjct  225  LDNAYSTEFYQNYNFFDLRYCNWQKDLFHGVLPHQQYGETAVASITPDVTGK--LTLSNF  282

Query  293  Q----SPTNSSVSIGTDDANSKTLIASGTNLTLDVLALRRGEALQRFREISLCTPLNYRS  348
                 SPT +S   GT    +K L A  T   L +L LR+ E LQ+++EI+     +Y+ 
Sbjct  283  STVGTSPTTAS---GT---ATKNLPAFDTVGDLSILVLRQAEFLQKWKEITQSGNKDYKD  336

Query  349  QIKAHFGVDVGAAMSGMSTYIGGEASSLDISEVVNTNITETNEALIAGKGVGTGQSSESF  408
            Q++ H+GV VG   S + TY+GG +SS+DI+EV+NTNIT +  A IAGKGVG      +F
Sbjct  337  QLEKHWGVSVGDGFSELCTYLGGVSSSIDINEVINTNITGSAAADIAGKGVGVANGEINF  396

Query  409  YAKD-WGILMCIYHSVPLLDYVLSAPDPQLFTSENTSFPVPELDSIGLEPISVAYYSNNP  467
             +   +G++MCIYH +PLLDY     DP      +T + +PE D +G++ + +    N  
Sbjct  397  NSNGRYGLIMCIYHCLPLLDYTTDMLDPAFLKVNSTDYAIPEFDRVGMQSMPLVQLMNPL  456

Query  468  TELPSASGLLSDPTVTVGYLPRYFAWKTSLDYVLGAFTTTEKEWV  512
                +ASGL+      +GY+PRY  +KTS+D  +G F  T   WV
Sbjct  457  RSFANASGLV------LGYVPRYIDYKTSVDQSVGGFKRTLNSWV  495



Lambda      K        H        a         alpha
   0.318    0.133    0.407    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1158503178300