bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-34_CDS_annotation_glimmer3.pl_2_2

Length=673
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  585502.HMPREF0645_1835                                              62.0    3e-07


> 585502.HMPREF0645_1835
Length=553

 Score = 62.0 bits (149),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 61/238 (26%), Positives = 103/238 (43%), Gaps = 30/238 (13%)

Query  425  DTSGGSFTLDTLNLAKKVYTMLNRIAISDGSYNAWIQTVYTSGGLNHVETPI-------Y  477
            D+S G F++ +L  A  V  +L+    +  ++   ++  Y       VE P        Y
Sbjct  290  DSSEGDFSVSSLRAAFAVDKLLSVTMRAGKTFQDQMRAHYG------VEIPDSRDGRVNY  343

Query  478  LGGSSMEIEFQEVVNNSGT---EDQP----LGSLAGRGVTDNHKGGVIKYKPDEPGYIFC  530
            LGG   +++  +V   SGT   E +P    LG +AG+G       G I +   E G + C
Sbjct  344  LGGFDSDMQVSDVTQTSGTTATEYKPEAGYLGRVAGKGTGSGR--GRIVFDAKEHGVLMC  401

Query  531  ITSITPRVDYYQGNDWDLEIETLD--DLHKPQLDGIGFQDRLYKNINSSAKREDLIKSIG  588
            I S+ P++ Y      D  ++ LD  D   P+ + +G Q      I+S    +     +G
Sbjct  402  IYSLVPQIQY-DCTRLDPMVDKLDRFDYFTPEFENLGMQPLNSSYISSFCTTDPKNPVLG  460

Query  589  KQPAWLDYMTSFNRNYGNFALIENEGWMCLNR-----VFGDIDTYTTYIQPHLYNNIF  641
             QP + +Y T+ + N+G FA  +      ++R      F  ++     I P   N+IF
Sbjct  461  YQPRYSEYKTALDVNHGQFAQSDALSSWSVSRFRRWTTFPQLEIADFKIDPGCLNSIF  518


 Score = 38.1 bits (87),  Expect = 7.2, Method: Compositional matrix adjust.
 Identities = 22/67 (33%), Positives = 30/67 (45%), Gaps = 0/67 (0%)

Query  22  NYNRSTHDLSRVIRTTAAPGTLIPTFKEKALPGDTFNIKIRSHILTHPTVGPLFGSFKVQ  81
           N NR+  DLS+    TA  G L+P      +P D   I  +  + T P     F S +  
Sbjct  14  NRNRNAFDLSQRHLFTAHAGMLLPVLNLDLIPHDHVEINAQDFMRTLPMNTAAFASMRGV  73

Query  82  NDFFFCP  88
            +FFF P
Sbjct  74  YEFFFVP  80



Lambda      K        H        a         alpha
   0.318    0.136    0.405    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1549785742570