bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-35_CDS_annotation_glimmer3.pl_2_4

Length=360
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0987                                              38.5    1.9


> 888743.HMPREF9141_0987
Length=437

 Score = 38.5 bits (88),  Expect = 1.9, Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 85/208 (41%), Gaps = 32/208 (15%)

Query  63   WAYTN-FDSPAAQRAAYAAAGVNPFVEGSSIQPA------QVNPGSVQ-AAQGGDVPGSG  114
            W   N ++SPAAQ   Y  AG+NP++   ++Q        Q  P   Q  AQ     G G
Sbjct  126  WNQMNQYNSPAAQMQRYTDAGINPYIAAGNVQTGNAQSALQSAPAPQQHVAQVMPATGMG  185

Query  115  PYQMNPMSALQSGASSIIQNAMLDRQMKNADADIA----LKDAQRIKTLAEAQGQTNENS  170
                N  + + +  S   QN +   Q K  DA+ +    L  AQ  K  AE     N+NS
Sbjct  186  DAVQNSFAQIGNVISQFAQNQLALAQAKKTDAEASWIDRLNSAQMGKLGAETLNIHNQNS  245

Query  171  LF---------EFARSAAESDALSKRFRLELDKVNAEFAQAFAEADLAQ----------R  211
            L                  SD   ++  L  + V+A+  +A  E+DLA            
Sbjct  246  LLGLDYQIKSDTLGNYKLLSDLSVQQAALTNNLVDAQTRKALFESDLAMVESHIKAKYGE  305

Query  212  KALLQEIWSRV-KSNLAQAARTDADRLT  238
            K +LQEI   V +  L   +  ++++LT
Sbjct  306  KQVLQEISESVSRQYLNYVSAHNSEKLT  333



Lambda      K        H        a         alpha
   0.311    0.124    0.330    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 666605079800