bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-39_CDS_annotation_glimmer3.pl_2_2

Length=716
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0985                                              82.4    1e-13


> 888743.HMPREF9141_0985
Length=531

 Score = 82.4 bits (202),  Expect = 1e-13, Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 117/272 (43%), Gaps = 44/272 (16%)

Query  480  GGSYRDWQEAVFGVRV--SRAAESPIYVGGYASEIVFDEVVSTAAFESGETGQEPLGSLA  537
            G  Y    EA FG RV  SRA ++  ++GG+ + +V  EVV+ + F+ G      LG L 
Sbjct  269  GLDYSSQIEAHFGFRVPESRAGDAR-FIGGFDNPVVISEVVNQSEFDRGADESPCLGDLG  327

Query  538  GRGRETSKRGGKNIKIRCEEPSLIMILGSIVPRVDYSQGNKWWTRVDTMN------DFHK  591
            G+G         +I    +E  +IM + S+VP+ +Y+      T  D  N      DF +
Sbjct  328  GKG--VGSLNSSSIDFDVKEHGIIMCIYSVVPQTEYNG-----TYFDPFNRKLRREDFFQ  380

Query  592  PNLDQIGFQELLSQEMHG------------RAWRVNANYKTTDFS-----VGKQPAWTEY  634
            P    +G+Q +++ ++              +  R+ A Y  +        +G Q  + EY
Sbjct  381  PEFADLGYQPVVTSDLISTYLDNPVPDGPEKQKRLAAGYPLSSIEANNRLLGWQVRYNEY  440

Query  635  TTTVNETYGDFAAGEPLEYMAFNRVYDVANDPKLKD----------ATTYIDPQIFNKAF  684
             T+ +  +G+F +G  L Y    R YD   D K  D          A  Y++P I N  F
Sbjct  441  KTSRDLVFGEFESGLSLSYWCSPR-YDFGFDGKAGDKKLVNSPWSPAHFYVNPSILNTIF  499

Query  685  ANSNLDAKNFWIQIGFDVIGRRVKSAREIPNL  716
              S + A +F +   FDV   R  S   +  L
Sbjct  500  LVSAVKADHFLVNSFFDVKAVRPMSVSGLAGL  531



Lambda      K        H        a         alpha
   0.316    0.133    0.388    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1664833902220