bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-40_CDS_annotation_glimmer3.pl_2_4

Length=315
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  406984.CPK_ORF00729                                                 88.6    8e-19


> 406984.CPK_ORF00729
Length=121

 Score = 88.6 bits (218),  Expect = 8e-19, Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 64/111 (58%), Gaps = 14/111 (13%)

Query  31   TEFVEIPCGKCSGCRLQRSREWANRCMLELEYHKSSYFVTLTYDDAHVPIHYYSDPETGE  90
              +V +PC KC  CR Q ++ W+ RC+ E   ++ + F+TLTYDD H+       P+ G 
Sbjct  17   NRWVLMPCLKCRFCRTQHAKVWSYRCVHEASLYEKNCFLTLTYDDKHL-------PQYG-  68

Query  91   ALPSMSLVKRDFQLFMKRLRKKFG-EGIRFFASGEYGSLTFRPHYHAIIFG  140
                 SLVK   QLF+KRLR +     IR+F  GEYG+   RPHYH +IF 
Sbjct  69   -----SLVKLHLQLFLKRLRDRISPHKIRYFGCGEYGTKLQRPHYHLLIFN  114



Lambda      K        H        a         alpha
   0.321    0.137    0.419    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 535902157120