bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-41_CDS_annotation_glimmer3.pl_2_2

Length=582
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0985                                              78.6    1e-12


> 888743.HMPREF9141_0985
Length=531

 Score = 78.6 bits (192),  Expect = 1e-12, Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 123/291 (42%), Gaps = 49/291 (17%)

Query  330  FTVNELRLAFAYQRFLESMAR-NGSRYTELLLGLFGVRSPDARLQRPEYLGGNRIPISVS  388
             +VN+LR AFA  + LE+  R NG  Y+  +   FG R P++R     ++GG   P+ +S
Sbjct  246  LSVNDLRAAFALDKMLEATRRANGLDYSSQIEAHFGFRVPESRAGDARFIGGFDNPVVIS  305

Query  389  EVTNNAQ-----TPEDYLGDLGAKSSTGDVNHDFIK-SFTEHGYLFGLFVV----RYDHS  438
            EV N ++          LGDLG K   G +N   I     EHG +  ++ V     Y+ +
Sbjct  306  EVVNQSEFDRGADESPCLGDLGGK-GVGSLNSSSIDFDVKEHGIIMCIYSVVPQTEYNGT  364

Query  439  YSQGIERFWTRKKFTDFYNPKFAHLGETGVYQAEIMAT---------PE-----------  478
            Y     R   R+   DF+ P+FA LG   V  +++++T         PE           
Sbjct  365  YFDPFNRKLRRE---DFFQPEFADLGYQPVVTSDLISTYLDNPVPDGPEKQKRLAAGYPL  421

Query  479  -NMADPTKVFGFQEIWADYRYKPSLVTGEMRPGVTNSLAHW-----------HLADHYAK  526
             ++    ++ G+Q  + +Y+    LV GE   G+  SL++W              D    
Sbjct  422  SSIEANNRLLGWQVRYNEYKTSRDLVFGEFESGL--SLSYWCSPRYDFGFDGKAGDKKLV  479

Query  527  VPTLSDGWIREDKANVDRVLAVQSSVADQFWCDLWISNMCTRPMPMYSIPG  577
                S      + + ++ +  V +  AD F  + +      RPM +  + G
Sbjct  480  NSPWSPAHFYVNPSILNTIFLVSAVKADHFLVNSFFDVKAVRPMSVSGLAG  530



Lambda      K        H        a         alpha
   0.319    0.136    0.429    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1291617057280