bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-43_CDS_annotation_glimmer3.pl_2_1

Length=306
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  575615.HMPREF0670_00477                                             67.8    6e-10


> 575615.HMPREF0670_00477
Length=541

 Score = 67.8 bits (164),  Expect = 6e-10, Method: Compositional matrix adjust.
 Identities = 51/191 (27%), Positives = 90/191 (47%), Gaps = 17/191 (9%)

Query  47   EARLDNATSATIN--QLRQAISVQQYYEALARGGSRYREQIRAIWDVIISDKTVQVPEYL  104
             A+L+ A+   +N   +R A ++ +      R G  Y EQI A + V +S+       YL
Sbjct  271  SAKLNMASPDVLNVSAIRSAFALDKLLSISMRAGKTYAEQIEAHFGVTVSEGRDGQVYYL  330

Query  105  GGGRYHVNINQIVQTSGQQTSNDTPIGE----------TGAMSVTPINESSFTKSFEEHG  154
            GG   +V +  + QTSG    N + +G           TG  + +   E  F    +E G
Sbjct  331  GGFDSNVQVGDVTQTSGTTNPNVSEVGNAKLAGYLGKITGKGTGSGYGEIQFDA--KEPG  388

Query  155  FVIGVCCVRHNRSYQ-QGLERFWSRKDRLDYYVPQFANLGEQPVKKKEIMLTGDTTDDET  213
             ++ +  V     Y    L+ F +++ R DY++P+F NLG QP+    + L  +   D +
Sbjct  389  VLMCIYSVVPAMQYDCMRLDPFVAKQTRGDYFIPEFENLGMQPIVPAFVSL--NRAKDNS  446

Query  214  FGYQEAWADYR  224
            +G+Q  +++Y+
Sbjct  447  YGWQPRYSEYK  457



Lambda      K        H        a         alpha
   0.315    0.132    0.395    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 508498069540