bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-4_CDS_annotation_glimmer3.pl_2_4

Length=587
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  483216.BACEGG_02720                                                   110   3e-23


> 483216.BACEGG_02720
Length=422

 Score =   110 bits (275),  Expect = 3e-23, Method: Compositional matrix adjust.
 Identities = 115/398 (29%), Positives = 177/398 (44%), Gaps = 52/398 (13%)

Query  227  GLLKYINYRDYQLFAKRFRKYLFTRIGSYEKISSYVVSEYSPKTFRPHFHILFFFDSDEV  286
            G L Y+   D QLF KRFR Y+  R    EK+  + + EY P  FRPH+HIL F  SDE 
Sbjct  39   GYLPYLRKFDLQLFFKRFRYYVAKRFPK-EKVRYFAIGEYGPVHFRPHYHILLFLQSDEA  97

Query  287  AKNIRQAVFQSWKLGRVDTQLARDSAGSYVSGYLNSVVSLPGIFTDVS---FTKNKSRFS  343
             +   + V ++W  GRVD QL++    SYV+GY+NS V +P + T  +   F  +  +  
Sbjct  98   LQVCSKVVSEAWPFGRVDCQLSKGKCSSYVAGYVNSSVLVPKVLTLPTLCPFCVHSQKLG  157

Query  344  KLFGYESFRQTIK--TPEQAIERLSERILFVRNGKPCEFTPPFSYISRLLPRFVPYSSNF  401
            + F  +S R  +   TPEQ ++R       V NG+  EF    S  +   P+       F
Sbjct  158  QGF-LQSERAKVYSLTPEQFVKR-----SIVINGRYKEFDVWRSAYAYFFPK----CKGF  207

Query  402  VVETRTVLRSIRGVLQLFRRNEPFKKETPTNISEFVHTYTVTLYEKYGYCYDTLPEC---  458
              ++        G+    RR  P  + T     E V        +K  YC D   E    
Sbjct  208  ADKSSRERAYSYGLYDTARRLFPSAETTFALAKEIVGYIYYFHNKKDTYCLDIFGEVSDQ  267

Query  459  --LRVYLSYTRSVKEIHYFTDKLKNKLCRPLYIYRIWESLGLSDDCI-------------  503
              L  +  Y    + ++Y  D +  ++CR  Y++R++  L LS   +             
Sbjct  268  SDLYQFSQYFFEPEIVNYSLDSI--EMCR--YVHRVYTELLLSKHFLYFVCDRPTLSEQK  323

Query  504  --ISLSDEYMSRCRSMSLEKQLSIQQEMFEREGYSD-ELLSLFYINKPQKKV-NNRYFQE  559
              + L +E+ SR   M L+     QQ  +E +   D +L+S  + N       +N YF  
Sbjct  324  RKLKLIEEFYSRLDYMHLKTFFENQQLFYESDLVGDLDLMSDAWENSYYPFFYDNVYFSS  383

Query  560  --WKDKNYYEVHYI--------RVKHKKLNDENNVFLE  587
              +K    Y ++ +        R+KHKKLND N +F++
Sbjct  384  EVYKKTPVYRLYDMQISKLFSDRIKHKKLNDLNKIFVD  421



Lambda      K        H        a         alpha
   0.323    0.138    0.422    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1306395284480