bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters



Query= Contig-51_CDS_annotation_glimmer3.pl_2_1

Length=379
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  483216.BACEGG_02721                                                   162   2e-41


> 483216.BACEGG_02721
Length=578

 Score =   162 bits (409),  Expect = 2e-41, Method: Compositional matrix adjust.
 Identities = 117/371 (32%), Positives = 168/371 (45%), Gaps = 42/371 (11%)

Query  19   NMLDMRFSNLPLDYFNGVLPTPQFGSESVVSLSQNADVYTGFDKSQWQTLDGSAFPSGSV  78
            N  D+R+ N   D F+GVLP  Q+G  +V S++   DV      S + T+  S       
Sbjct  238  NFFDLRYCNWQKDLFHGVLPHQQYGETAVASIT--PDVTGKLTLSNFSTVGTSP------  289

Query  79   SSSNSDRSLTANGKSIEHVHILPSGSITSSLSIAALRQATALQKYKEIQLANDPDFESQI  138
                     TA+G + ++   LP+      LSI  LRQA  LQK+KEI  + + D++ Q+
Sbjct  290  --------TTASGTATKN---LPAFDTVGDLSILVLRQAEFLQKWKEITQSGNKDYKDQL  338

Query  139  EAHFGIKPKHDMHK-SRFIGGSSSMIDINPVVNQNLGAGQNQDNQAVTKAAPTGQGGASF  197
            E H+G+       +   ++GG SS IDIN V+N N+      D     K      G  +F
Sbjct  339  EKHWGVSVGDGFSELCTYLGGVSSSIDINEVINTNITGSAAAD--IAGKGVGVANGEINF  396

Query  198  KFTADTFGVVIGIYRCTPVLDYSHVGIDRTLLKTDASDFVIPELDSIGMQQTFQCELFAP  257
              +   +G+++ IY C P+LDY+   +D   LK +++D+ IPE D +GMQ     +L  P
Sbjct  397  N-SNGRYGLIMCIYHCLPLLDYTTDMLDPAFLKVNSTDYAIPEFDRVGMQSMPLVQLMNP  455

Query  258  TSQMTASAPDKRKYDMSRTFGYAPRYSEYKVSFDRYNGAFCDTLKSWVTGF-NTHIFDSD  316
                  ++            GY PRY +YK S D+  G F  TL SWV  + N  +    
Sbjct  456  LRSFANAS--------GLVLGYVPRYIDYKTSVDQSVGGFKRTLNSWVISYGNISVLKQV  507

Query  317  RW-NDRSYFSISVP---------QLFVCRPDIVKDIFALQTYHDSNDDNLYVGMVNMCYA  366
               ND      S P           F   PD +  IFA+Q   D+N D           A
Sbjct  508  TLPNDAPPIEPSEPVPSVAPMNFTFFKVNPDCLDPIFAVQAGDDTNTDQFLCSSFFDIKA  567

Query  367  TRNLSRYGLPY  377
             RNL   GLPY
Sbjct  568  VRNLDTDGLPY  578



Lambda      K        H        a         alpha
   0.317    0.132    0.390    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 717605119280