bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.30+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggnogv4.proteins.all.fa
           14,875,530 sequences; 5,112,597,290 total letters





Query= Contig-5_CDS_annotation_glimmer3.pl_2_3

Length=368
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  888743.HMPREF9141_0987                                              62.4    5e-08


> 888743.HMPREF9141_0987
Length=437

 Score = 62.4 bits (150),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 89/309 (29%), Positives = 134/309 (43%), Gaps = 39/309 (13%)

Query  4    LIGAAIGAISQNFNTSESIAANKQEQQSNRDYNLNLARL---QNQWNREQWEREAQYNSP  60
            L+G   G  S   N +    AN+   Q  R+ N N  ++   QN +N   W +  QYNSP
Sbjct  79   LLGGLFGGHS---NKTAQDRANETNLQIAREANQNQYQMFQEQNAFNERMWNQMNQYNSP  135

Query  61   AAYRARLASAGMNSDLAYSNVNGVAPASPGMTSGEPSSPVDYSAIAGKQTIGSAVSQALA  120
            AA   R   AG+N  +A  NV      S   ++  P   V  + +     +G AV  + A
Sbjct  136  AAQMQRYTDAGINPYIAAGNVQTGNAQSALQSAPAPQQHV--AQVMPATGMGDAVQNSFA  193

Query  121  ------NEQARANIALTQAQKNKTDEEAGKTSEEAEGVRIDNLTRG--ASNTLEIQLKEG  172
                  ++ A+  +AL QA+  KTD EA          R+++   G   + TL I  +  
Sbjct  194  QIGNVISQFAQNQLALAQAK--KTDAEASWID------RLNSAQMGKLGAETLNIHNQNS  245

Query  173  VIKLNDSVKQLNEQNKKNLQQLLENLKLESNNLAEQWQVIRETWSNLRVDRALKMIDLKF  232
            ++ L+  +K     N K L  L       +NNL +     R+      +      I  K+
Sbjct  246  LLGLDYQIKSDTLGNYKLLSDLSVQQAALTNNLVDAQ--TRKALFESDLAMVESHIKAKY  303

Query  233  REKQNVAILKKIS---SETNLNYVQASSMTKRLMLDMALGKTQMNLMTQQAITETQKRVN  289
             EKQ   +L++IS   S   LNYV A +  K       L   Q NLM +QA TE +KR  
Sbjct  304  GEKQ---VLQEISESVSRQYLNYVSAHNSEK-------LTTAQCNLMFEQAKTEVEKRFG  353

Query  290  MRTEDWYNR  298
            +R ++  +R
Sbjct  354  IRLDNDTSR  362



Lambda      K        H        a         alpha
   0.311    0.124    0.347    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 684438496120